Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi299g00028 ATGGAAGTGGAAAAACCGAATCTGCAATTAGCCTTTCCCTTCTGGAAACCCCTTCCTCGTAGGTTCCCTCCCGATTCTCCTTTCTTCGCTTCCGGCAACCTCGAACGAGAACTTCTTGCTAAACAGGTTGCCTTGGAATTAACAGAAGAGAAGCAACAGCTTGAAATTTGGATACATGAGGAAGGAAGGGAGGTCTTCTGTCCCATTGTCAGTTGTGGAGCTCGCTTGACTTCAGTGGAGGACTTTGAAAATCACTATAATGCAAGGCATACTGCATCATGTTCTGTGTGTTCCAGGGTCTACCCAACATCACGCCTGCTCAGCATACATGTATCTGAAGCGCATGATTCTTTCTTTCAGGCAAAAGTTGCGCGTGGCTATGATATGTATGAATGCTTAGTGGAAGGTTGTGGTATGAAATTCAAAAGCTACAATAGTAGGCAGCAGCATCTAGCTGATAAGCATAAATTTCCCACCTCATTTGAGTTTTTCAAGAAGTCTCGGCCTTCAAAGAAACAGAGGCTGAAGTCTCAACGCAAACAAGCTGCCCATAAGAAGGATGCATCAGCAATGATGGAAGTGGAAAATGCAGCCATAGATGACCTTGTTTCAGCAGTCTCTAAATTGAATACTTCAGACTCCACTCCTTCCTCTATCAGCTTTGGTCGCCGCCACAAAGGTTTGTCATTTATCCCTCGAGCTGTTCAGCATGGAAGGGGATCAAACTCAGCATCGTCGATTACAAAGAGATAA 753 0.4475 MEVEKPNLQLAFPFWKPLPRRFPPDSPFFASGNLERELLAKQVALELTEEKQQLEIWIHEEGREVFCPIVSCGARLTSVEDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYDMYECLVEGCGMKFKSYNSRQQHLADKHKFPTSFEFFKKSRPSKKQRLKSQRKQAAHKKDASAMMEVENAAIDDLVSAVSKLNTSDSTPSSISFGRRHKGLSFIPRAVQHGRGSNSASSITKR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi299g00028 250 ProSitePatterns Zinc finger C2H2 type domain signature. 67 90 IPR013087 -
Sebi299g00028 250 MobiDBLite consensus disorder prediction 236 250 - -
Sebi299g00028 250 ProSitePatterns Zinc finger C2H2 type domain signature. 132 155 IPR013087 -
Sebi299g00028 250 MobiDBLite consensus disorder prediction 230 250 - -
Sebi299g00028 250 SMART c2h2final6 130 155 IPR013087 -
Sebi299g00028 250 SMART c2h2final6 92 115 IPR013087 -
Sebi299g00028 250 SMART c2h2final6 65 90 IPR013087 -
Sebi299g00028 250 PANTHER UNCHARACTERIZED 9 238 IPR039258 -
Sebi299g00028 250 MobiDBLite consensus disorder prediction 168 190 - -
Sebi299g00028 250 ProSitePatterns Zinc finger C2H2 type domain signature. 94 115 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi299g00028 9 246 C2H2 Transcription Factor Family AT5G14140 63.710 8.86e-114 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi299g00028 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi299g00028 - - gmx:100819557 414.846