Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi299g00001 ATGTGTTCACCTCCTTCGTGCAAGAAGAAATCCTCTGCAGCTTCGATCTCTTTTTCGCTCACTGCTGAATCTTCTTCCTCTGTTGATGCAACTAACACTCCGCTGCTCTCATTCACATCTGTGACTTCTTCCTCGAAAATTTCCGCTGCCTTCACTGATTCATTCTTCATGCATCAACCTGGTGAGAATTCCACCTCAAAGCTTGAATGGAAACCATCACCTGGTCCCTTTCTTTTTGGAAGCTTCAAACTAGCAGATTCTTCATCTTCTTACAACCTCAAAACAAAGCTAGGAATGGATGAGACTGACAATCTCTGCTGCGATTTGGAAGCACACAGTGACTCCTCAGCTATCAATTGCCACCGACTAGAGGTTCCTTCCGGCGTCCCTTCCGTTCCCATCATCGTGAAGTCTGGTAATGTTTTTATTGTCTCCAAGCTTTGTTACATCTCATCTGCTCAAGTTCGAGCACGAGAATGTTTTTCATTCCAATATGTTCGACCTTTTGAACAAACTCACACTCATGTTGGTCACCTACTGTTCGATGAAATGTTTGTGAAAAATTCAGAGTCTAAAAAGGAACCGCAAAAGGTGTTTGATAAAATTTCTGAGAGAACTTTTATTTCTTGGAACTCTGTTACAATTGCTTGTGTTGAGAATCTTTGGTTACATAATGGAATGAGTGAGGATCTGGTTCTTGTTGTCACTCATCACAAAGATGATGCTAAAGAACTCATTCCTTCCGTTCTGTTATCTTTGAGTGGTGATCTAGAGTGCAAGGACTTGATGGTTTGGTTGGAGTTTGATTTGGCACAAGTTATGCTTGCAGCTTGCAGAGGAGAATTGAGTGGGGTATCACTAAACTGGTCTCCTGGGTCTGCCAAGGTTGTGCCTCCACTTGAGCTCAACAAGCTGTTTATAATTGTCGTTGTATTGTCAATGGCATTAACCCCATTTTTGAATGAAGCTAGAAGGAGGGCTGCTAGTTTTATTGAAGACAAATCTGATGTTGAGAATAAACCGAAAGCTTCTGGGATGGTTGACTTCAATGCTAGTGAACCTGTTGTTATCCCTGGATTTGGACAAATGGCCCAGGTCCTGGCCAATTTCCTGTCCAACCCATTGGCTTCAAGAGGAGATAGTGATGCAACAGGATGGCCTTATGTGGCATTTGATCCTGACCCAAAGGTAGTAAAGGCAGCTAGAAAACTTATTCTTCCAATTCTCTATGGGGATGGATCACGTCCAGCCGTCCTTCAATCTGCTGGTATTGATTATGTACACTGGGAAGAAGAAGATAATTGA 1305 0.4261 MCSPPSCKKKSSAASISFSLTAESSSSVDATNTPLLSFTSVTSSSKISAAFTDSFFMHQPGENSTSKLEWKPSPGPFLFGSFKLADSSSSYNLKTKLGMDETDNLCCDLEAHSDSSAINCHRLEVPSGVPSVPIIVKSGNVFIVSKLCYISSAQVRARECFSFQYVRPFEQTHTHVGHLLFDEMFVKNSESKKEPQKVFDKISERTFISWNSVTIACVENLWLHNGMSEDLVLVVTHHKDDAKELIPSVLLSLSGDLECKDLMVWLEFDLAQVMLAACRGELSGVSLNWSPGSAKVVPPLELNKLFIIVVVLSMALTPFLNEARRRAASFIEDKSDVENKPKASGMVDFNASEPVVIPGFGQMAQVLANFLSNPLASRGDSDATGWPYVAFDPDPKVVKAARKLILPILYGDGSRPAVLQSAGIDYVHWEEEDN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi299g00001 434 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 355 426 IPR036291 -
Sebi299g00001 434 Coils Coil 320 340 - -
Sebi299g00001 434 Gene3D - 352 429 - -
Sebi299g00001 434 ProSiteProfiles RCK N-terminal domain profile. 354 434 IPR003148 GO:0006813
Sebi299g00001 434 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 297 425 - -
Sebi299g00001 434 Pfam TrkA-N domain 355 426 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi299g00001 Sebi-Chr299 196137 197441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi299g00001 297 424 Inorganic Solute Cotransporters AT4G04850 63.281 7.07e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi299g00001 K03455 - gmx:100798214 198.364