Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi298g00040 ATGTCAGCTAACAAGAATTCTGCAGAGAATGAGTCGGGAAGGAACAAATGGAAGGAAGTTGTGAGTGACAACATGGAAGTTCCTCCTGTCGCTGACGCTGATCCGGCCCTAGAGGATCTCGATTCAGATGACAAGCAAAGGAAAGCCTTGGGCGATGCGCTCGGGCTCGACCCTTTACAAGTCAAGTTTTGGTTCCAGAACAAGCGTACCCAAGTAAAGAATGAAAAGCTTCGTGCTGACAATGCTAGGTACAAGGAGGCACTGAGTCATGCTACATGCCCTACTTGTGGAGGGCCCTCTGTTGGGGAAATGTCCTTTTACGAACAACACTTGAGAATTGAGAATACCCGATTAAGAGAAGAGATTCAAAGGATGTCGGGAATGACAACGAAAATGATGGGAGAGCCTGTGAAACCGCTCTCTTACAATCACATGCCTTCGTGCACGCTTGATCTTGGGGGTGGAACTATGGAGCACGGTCAGGAACGATTGTGA 495 0.4828 MSANKNSAENESGRNKWKEVVSDNMEVPPVADADPALEDLDSDDKQRKALGDALGLDPLQVKFWFQNKRTQVKNEKLRADNARYKEALSHATCPTCGGPSVGEMSFYEQHLRIENTRLREEIQRMSGMTTKMMGEPVKPLSYNHMPSCTLDLGGGTMEHGQERL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi298g00040 164 Coils Coil 67 87 - -
Sebi298g00040 164 Pfam Homeodomain 44 73 IPR001356 GO:0003677
Sebi298g00040 164 CDD homeodomain 43 76 IPR001356 GO:0003677
Sebi298g00040 164 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 42 144 IPR042160 -
Sebi298g00040 164 Gene3D - 39 89 - -
Sebi298g00040 164 ProSiteProfiles 'Homeobox' domain profile. 45 75 IPR001356 GO:0003677
Sebi298g00040 164 MobiDBLite consensus disorder prediction 1 44 - -
Sebi298g00040 164 SUPERFAMILY Homeodomain-like 44 79 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi298g00040 Sebi-Chr298 1082084 1083007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi298g00040 43 157 Homeobox Transcription Factor Family AT4G04890 58.209 4.42e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Sebi298g00040 Homeodomain 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi298g00040 K09338 - sind:105167974 154.066