Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi298g00033 ATGGCGAAGAAGAAGGAGAAGAAAGTGAACGTCTCTGGAAAACCGAAGCACTCTCTCGACGTGAATCGTAGCAATGACGCGAAGAAGGAGTCGCGCTCCGCCGCCACCATCCGCCGCCTCAAGATGTACAACACCAGACCCGTCCGTGACCGCAAGGGCAAGGTCTTAACCCATGAGTTTCAGTCCAAGGATCTTCCCAGTACGCGAATCCAACCTGACCGCCGGTGGTTCGGGAACACTCGGGTTGTGAATCAGAAAGAGCTTGAGTTCTTCCGGGAAGAGCTACAGAACCGCATGTCGAGTAATTATAATGTTATTCTCAAGGAGAAGAAACTGCCGTTGTCACTCCTCAACGATCACCAAAAGCAAGCAAGGGTTCATCTTCTTGATAGAGAGCCTTTCGCCGATGCATTTGGACCTAAGACCAAAAGAAAGCGCCCGAGACTCTTGGCTGATGGTTATGAGTCCTTAGTTAAGAAAGCTGATGGTTCACAAGAGGCTTTTGAACAGAAGTATGGTCCTAGTGCATCTGCAGAAGCTAATGAAGCAGATGGATTTAGAGATTTGGTGCGGCATACTATGTTTGAAAAAGGCCAAAGCAAACGCATATGGGGTGAGCTCTACAAAGTCATAGATTCTTCGGATGTTGTCGTCCAGGTTCTAGATGCAAGGGACCCACAGGGCACAAGGTGTTACCATTTAGAGAAGCATTTGAAAGAAAATTGCAAACACAAACACATGGTGCTTTTATTGAACAAGAGTGATCTAGTTCCTGCTTGGGCAACTAAAAGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACTCTAGCATTCCATGCAAGCATTAACAAGTCCTTTGGAAAGGGTTCACTTCTATCTGTTCTGAGACAATTTGCTCGATTGAAAAGTGATAAGCAAGCAATATCTGTTGGATTTATTGGATATCCCAATGTGGGGAAGTCATCAGTGATCAATACATTGCGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAGACAAAAGTCTGGCAGTATATAACTCTTACAAAGAGGATCTTTTTGATTGATTGTCCAGGTGTTGTCTACCACAACAATGACTCTGAAACAGATGTAGTGCTGAAGGGTGTGGTACGTGTAACAAACTTGAAAGATGCAACAGACCATATAGGTGAAGTTTTGAAACGCGTGAAAAAGGAGCACTTGGAAAGAGCATATAGAATAAAAGAGTGGGATGATGAAAATGACTTTCTACTTCAGCTTTGCAAATCAACTGGCAAACTTCTGAAGGGTGGTGAGCCTGACCTGATGACTGCTGCAAAGATGGTACTTCATGACTGGCAGAGGGGTAGAATTCCCTTTTTTGTTCCTCCTCCATGGCAGGATGACTTGTCTGAGGAACCCAATATTCATGGCATAGATGTTGATGATGCAGTTGACGGCGACCAGGCATCTGCTGCTATTAAAGCTATTGCAGATGTTCTTTCATCCCAGCAGCAAAGAAGTGTACCTGTTCAAAGGGATTTGTATAGCGAGAATGAGTTAAAGGGAGAAACTACTGACCAAGTTCTAAACACAGGGGATAATACATTTGAAGATAGTGACACATTTGAGCAAGATCCAGACATTAAGTGCCATTATTTTGCTATCCATGTTATGGGAACAAACTATAAGGCAGCAGAGAGGATGAGGGAGACAGTTCATGGATGGGCGAAGGAAGCTAGGAGGAAGAGAAGACATGTGTTCACTGATGACTCCACCATTTATATACTCCAGCACTGTATTGTCTATTGA 1797 0.4407 MAKKKEKKVNVSGKPKHSLDVNRSNDAKKESRSAATIRRLKMYNTRPVRDRKGKVLTHEFQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQNRMSSNYNVILKEKKLPLSLLNDHQKQARVHLLDREPFADAFGPKTKRKRPRLLADGYESLVKKADGSQEAFEQKYGPSASAEANEADGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKSDLVPAWATKRWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDVVLKGVVRVTNLKDATDHIGEVLKRVKKEHLERAYRIKEWDDENDFLLQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGRIPFFVPPPWQDDLSEEPNIHGIDVDDAVDGDQASAAIKAIADVLSSQQQRSVPVQRDLYSENELKGETTDQVLNTGDNTFEDSDTFEQDPDIKCHYFAIHVMGTNYKAAERMRETVHGWAKEARRKRRHVFTDDSTIYILQHCIVY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi298g00033 598 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Sebi298g00033 598 Gene3D - 365 457 IPR023179 -
Sebi298g00033 598 Pfam 50S ribosome-binding GTPase 310 400 IPR006073 GO:0005525
Sebi298g00033 598 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
Sebi298g00033 598 Gene3D - 194 364 IPR027417 -
Sebi298g00033 598 FunFam Nucleolar GTP-binding protein 2 367 457 - -
Sebi298g00033 598 MobiDBLite consensus disorder prediction 1 36 - -
Sebi298g00033 598 CDD NGP_1 206 362 IPR024929 GO:0005730
Sebi298g00033 598 FunFam Nuclear/nucleolar GTPase 2 203 365 - -
Sebi298g00033 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 437 IPR027417 -
Sebi298g00033 598 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Sebi298g00033 598 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Sebi298g00033 598 PANTHER GTP-BINDING PROTEIN-RELATED 28 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi298g00033 Sebi-Chr298 897175 902513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi298g00033 548 589 MLO family AT1G26700 58.696 4.80e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi298g00033 K14537 - gmx:100788649 981.474