Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi297g00074 ATGACGTCACGTGGTAGCAGCAGTGGGAGTAGCCGTGTCCGTGTGGGAAAATATGAAATAGGTCGGACCCTGGGTGAGGGAAACTTTGCTAAGGTGAAGTTTGCACGCAACACTGAGACCGGAGAGAATGTGGCCATCAAAGTTCTTGACAAACAAAAAATTCTCAAGCACAATATGACAGCCCAGGTGATGGCTAGCAAAACAAAGATATACATTGTAATGGAACTTGTGACTGATGGCCATCTGTTCGATAAAATTGCAAGTCACGGGAGACTGAAAGAAGATGAAGCAAGAAAATATTTTCAGCATCTTATTTGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTTTCATAGAGACTTAAAGCCAGAGAATTTGTTGTTGGATTCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTAAGTGCACTACCTCAACAAGTTCGAGAAGATGGGCTACTTCACACAACATGTGGTACGCCAAATTATATTGCCCCTGAGGTGATCCAGGACAAAGGCTATGATGGTGCAAAGGCTGATCTCTGGTCATGTGGTGTTATTCTTTTTATTTTAATGGCTGGCTACTTGCCCTTTGAAGATAACAATCTTATGGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCATGGTTTTCTTCAAAATCAAAGAAACTAATCAATAGAATCCTTGATCCCAATCCTGCTAAACGGATTACAATTGCTGAAGTCATTGAGAATGAGTGGTTCAAGAAGGGGTATGTGCCTCCTAGATTTTCAGAGGTCAATGTTAGTCTTGATGATGTACACGCTATTTTCAGTGAAGCAGAAGATTCACAAAATCTAGTTGTGGAAAGTCGAGAAGAGAGACCTGTTGCACCTGTGACTATGAATGCCTTTGAGCTTATCTTCACATCTCAGGGCCTCAACCTTGGAAATCTTTTCGAGAAGCAGATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCCGCAGATGAGATAATTTCAAAAATTGAGGAAGCTGCAATGCCTTTGGGTTTTAGTGTTAAGAAGAACAACTATAAGGTGAAGATTCAAGGGGAAAAGACTGGACGTAAAGGTCATGTATCAATAGTCACAGAGATATTTGAGGTGGCCCCTTCAGTTAACATGGTTGAGCTTCGAAAGTCTGGAGGAGATACTCTGGAATTTTACAAGGTGTACAAGAATCTATCTAGTGGGCTGAAAGATATCATTTGGAAAGCAGAGCCAACCGATGAAGGAACAGATGGCTAG 1290 0.4093 MTSRGSSSGSSRVRVGKYEIGRTLGEGNFAKVKFARNTETGENVAIKVLDKQKILKHNMTAQVMASKTKIYIVMELVTDGHLFDKIASHGRLKEDEARKYFQHLICAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYIAPEVIQDKGYDGAKADLWSCGVILFILMAGYLPFEDNNLMALYKKIFKAEFTCPPWFSSKSKKLINRILDPNPAKRITIAEVIENEWFKKGYVPPRFSEVNVSLDDVHAIFSEAEDSQNLVVESREERPVAPVTMNAFELIFTSQGLNLGNLFEKQMGLVKRETRFTSKCSADEIISKIEEAAMPLGFSVKKNNYKVKIQGEKTGRKGHVSIVTEIFEVAPSVNMVELRKSGGDTLEFYKVYKNLSSGLKDIIWKAEPTDEGTDG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi297g00074 429 Gene3D Transferase(Phosphotransferase) domain 1 77 257 - -
Sebi297g00074 429 FunFam Non-specific serine/threonine protein kinase 77 259 - -
Sebi297g00074 429 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Sebi297g00074 429 CDD CIPK_C 300 415 - -
Sebi297g00074 429 FunFam Non-specific serine/threonine protein kinase 293 419 - -
Sebi297g00074 429 Pfam NAF domain 296 356 IPR004041 GO:0007165
Sebi297g00074 429 Pfam Protein kinase domain 62 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi297g00074 429 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 404 - -
Sebi297g00074 429 SUPERFAMILY Protein kinase-like (PK-like) 14 271 IPR011009 -
Sebi297g00074 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Sebi297g00074 429 SMART serkin_6 18 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi297g00074 429 Gene3D Phosphorylase Kinase; domain 1 7 67 - -
Sebi297g00074 429 ProSiteProfiles Protein kinase domain profile. 18 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi297g00074 429 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Sebi297g00074 429 Gene3D Kinase associated domain 1, KA1 294 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi297g00074 Sebi-Chr297 1015078 1018847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi297g00074 64 429 CBL-interacting serine-threonine protein kinases AT1G30270 77.989 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi297g00074 Pkinase 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi297g00074 - - gmx:100788746 701.049