Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi297g00045 ATGGTTGCTCCTAATGCTGTGCCATTAGTCTACTTTTACCTAAACCAAAGCTATGAATATGATCATGATATTGATGCTACCCTAACCCAAGGACCCAAAATATTAGCACTAAAGAAGTCCTTATCTAAAGTTCTATCCATATACTACCCTCTCGCAGGTAGATTAAAAGATAAAATCTCCATTGAATGCAACGACCAAGGTGTGTCATTGCTTGTCACAAGGATCAAACTCACGCTATCCACGTTTATCCAAAACCATAACGAACCATCACTGAACTCTCTATTCCCTGATGAATTGCAGTGGAAGGATATGGGTTCAAGTGCGAGTTTAGTGGCCATTCAAATCAACTGTTTTGCATGCGGTGGAATAGCAATCAGTGTCTGTATGTCTCACAAAGTCGGTGACGTTTCCGTTCTATTCAACTTCCTCAATGATTGGGCTCTTTTCAACCGAAAAACTGAAGAAGAAAAATTAATAACTACCTTCCCTATATTTAACACAACAACTTCCCCGTTTCCACAGGGGGACTTGCCAGTTTTACCAGAATTTGTTTTCGTGAAACAGAAAACCGTTACGAGAAGGCTCGTGTTCCAAGGCTCAAAGATTGAGTCTCTCAAGGCTATGGTATCATCCCACAAGGTTGAAAATCCCTCGCGCGTGGAAGTTGTTATAGCACTTATTTACAAGTGTGTTGTTTTTGCTTTGGGATTAACCGCTAACAACACAACTTGGCGCGTGGTTGTCAACCTCCGCAAGAGAATGGTTCCTCCGCTACCTGAAAATTCAGTGGGAAATTTGGTTTTGAGCTTTTTCGCGTCCAACATGGAAAAGAGGGAAATGGAATTGCATGATGTGGTAAGCAGAACGAGAGAAGGGTTATTTGAATTTTGTGAGAAATATGTGAAGAAATTTGGGGATGTGTCATTTGTATCTGAGTTCCTAAATCGAGCAACTTCTACTTCAACTTTAGTTTCTTCCCCTCAGGAGAAGAAGAGTTCGTTGTTTTTTACTAGTTGGTGCAGGTTGGGGATGTATGAAACGGATTTTGGGTGGGGGAAACCAGTATGGGTGACCACTTGTGGCTGTCCAGTGAGGAATACCATAATTTTGTTGGATACGAAAGATGGGGATGGAGTTGAAGCGGTTGTGAACATGGAAGAGAATGACATGGCAAGGTTTGAGTGTGATGTGGAGCTGCTTCAATATGTCTCTCTTAATCCAAGCCATTGGGCATGCTAA 1239 0.4181 MVAPNAVPLVYFYLNQSYEYDHDIDATLTQGPKILALKKSLSKVLSIYYPLAGRLKDKISIECNDQGVSLLVTRIKLTLSTFIQNHNEPSLNSLFPDELQWKDMGSSASLVAIQINCFACGGIAISVCMSHKVGDVSVLFNFLNDWALFNRKTEEEKLITTFPIFNTTTSPFPQGDLPVLPEFVFVKQKTVTRRLVFQGSKIESLKAMVSSHKVENPSRVEVVIALIYKCVVFALGLTANNTTWRVVVNLRKRMVPPLPENSVGNLVLSFFASNMEKREMELHDVVSRTREGLFEFCEKYVKKFGDVSFVSEFLNRATSTSTLVSSPQEKKSSLFFTSWCRLGMYETDFGWGKPVWVTTCGCPVRNTIILLDTKDGDGVEAVVNMEENDMARFECDVELLQYVSLNPSHWAC 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi297g00045 412 Gene3D - 187 404 IPR023213 -
Sebi297g00045 412 Gene3D - 1 179 IPR023213 -
Sebi297g00045 412 PANTHER F21J9.9 4 404 - -
Sebi297g00045 412 Pfam Transferase family 28 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi297g00045 Sebi-Chr297 693789 695027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi297g00045 37 394 Monolignol Biosynthesis Gene Families AT5G48930 24.745 4.89e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi297g00045 - - gmx:100806928 441.81