Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi297g00044 ATGGAATTGATATCCAAAGAACTCATCAAACCCTCTACACCAACTCCTACACACCACAAAATTCACACCCTCTCTTTCATAGATCATATTGTTGCTCCTAATTACGTGCCAGTAATTTACTTTTACCCAAACAAGGCCTCTGAATATGACCACCAAGGATCCAAAATTTCAAACCTCAAGAAATCCTTATCCAAAGTCCTATCCATATACTACCCTTTTGCTGGTAGGTTCAGAGATCAAGTTTCCATTGATTGCAACGACCAAGGTGTCTCATTTCTTGTCACAAGGATCAAAACCAACCTATCAGAGATCCTCCACAACCCCACCGAAACAGAGCTGAATCCTCTGTTCCCTGATGAATTGCCATGGAGGGACATGGAATCAAATGCAACCATAGTAGCCATTCAAATCAACTGTTTCACTTGTGGGGGAATAGCTATCAGTGTGTGTTTGTCTCACAAAATGGGTGATGCTTCCACTCTTTTTAACTTCATCAATGATTGGGCCACAATGAACCAAAACCCCAATGAAGAAAAAACAGAGTTACCCTTCTTTGATGCAGGGGATTCTCTGTTCCCACAAAGGGACCTTCCAGTTTTCCCACAAGTTCTGTTTGTGAAACAGAACACAATATGCAAAAGATTTGTGTTTGAGGGGTCAAAGATTGAGTCTCTTAAGGCCATTGTAACATCTCAAAAAGTGGAAAACCCCACACGTGTTGAAGTTGTCATGGCACTGATTTACAAGCGTGTGGTTTCTGCTTTGGGATTGGATAACAACACACCTTTGAGAATTGCTGCAAATCTCCGCAAAAGAATGGTTCCTCCACTACCTGAAAAATCTGTTGGAAATTGGGTTTTGTCGTTTCCAGTGTCAGGGGAAAAAACAGGGGAAACAGAGTTGCATGAGTTGGTAAGCAAAACAAGAGAAGGGTTATCTGAGTTTTGTGACAAAACAGTGAAAAACTTTGGGGATTTTTCATTTGTATGTGAGTTTTTAAAAAAGGTTACTTCTTTACCAAAACCAAAGGAAGTTACTGCTTCAAATGATTGTAATAATAAGAAGCCAAGTTTGATTTTCTTTGCTAGCTGGTGCAGGCTTCCAGCTTATGAAGTGGATTTTGGGTGGGGTAAGCCAATATGGGTCACTAGTATTGGGTCTCCAGTGAGGAATAGTGTGGTTTTGATGGATACAAAAAATGGGAATGGGATTGAAGCGCTTGTGAACATGGAAGAACAAGACTTGGGTATATTTGAGCGTGATGTGGAACTCCTTCAATATGCTTCTCTTAATCCAAGTGTATGGTAG 1308 0.406 MELISKELIKPSTPTPTHHKIHTLSFIDHIVAPNYVPVIYFYPNKASEYDHQGSKISNLKKSLSKVLSIYYPFAGRFRDQVSIDCNDQGVSFLVTRIKTNLSEILHNPTETELNPLFPDELPWRDMESNATIVAIQINCFTCGGIAISVCLSHKMGDASTLFNFINDWATMNQNPNEEKTELPFFDAGDSLFPQRDLPVFPQVLFVKQNTICKRFVFEGSKIESLKAIVTSQKVENPTRVEVVMALIYKRVVSALGLDNNTPLRIAANLRKRMVPPLPEKSVGNWVLSFPVSGEKTGETELHELVSKTREGLSEFCDKTVKNFGDFSFVCEFLKKVTSLPKPKEVTASNDCNNKKPSLIFFASWCRLPAYEVDFGWGKPIWVTSIGSPVRNSVVLMDTKNGNGIEALVNMEEQDLGIFERDVELLQYASLNPSVW 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi297g00044 435 PANTHER F21J9.9 2 429 - -
Sebi297g00044 435 Pfam Transferase family 2 424 - -
Sebi297g00044 435 Gene3D - 1 199 IPR023213 -
Sebi297g00044 435 Gene3D - 207 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi297g00044 Sebi-Chr297 687960 689267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi297g00044 8 420 Monolignol Biosynthesis Gene Families AT5G48930 25.843 3.34e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi297g00044 - - gmx:100806928 517.309