Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi297g00039 ATGGCCATTTTGGATGCTCTGTTAGGAACCGCCAATGTGGCATTCTTCTATGATAATGTAGTTGATGCGGTTTCCTTGCCTATGCTGTTGCTTCTGTGTTTCAATGCACTGCCTAATGTTTCTGCAAGGGAACAAAGTGACATGGAACAGCGGTTACTTCAGAAAGAGTTGGAATTTTCAAGGGATGAAGGTGAAGTGGTCTTCACAAATGCAAGCATGTGGAGCAAACTCACGTTTAGATGGCTGAATCCTATATTTAACAGGGGTCGGATTCAGAAACTTGAACTTGCGCATATTCCTTCTGTTCCTCATTCTGAAACTGCAGAAAGTGCTTCTTTCATGTTGCTAGAATCACTTCGCAAACAGAAACTTGAAGGGGGTTCTTTGACAAAAGCTATCACACATTCTATATGGAAATCCTTGGCCTTAAATGCAATTTTAGCAGGGGTTAACACTATTGCCTCTTATATTGGTCCATTGTTGATCTCAAGCTTTGTGAATTTTTTATTGGAGAATAATAGTAATGATAATTCAAGCATCCAATATGGATTGATTCTTGCATTCATTTTCTTCCTGTCAAAGACGGTGGAGTCTCTGAGTCAGAGACAATGGTACTTTGGTGCTCAACGAATTGGAATTCAGGTGCGTGCAGCTCTTATGGCTTTAGTTTATAGCAAGTCCCTTATGATGAAGTGTGCTGGGCCTACACATGGTAAAGTCATAAATTTGATCAATGTGGATGTTGAAAGAATTGGGGATTTCTGTTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTCATTTTGGCCTTGGTAATCTTGTACATAAACCTGGGTTCTACCCCTTCATTTGCTGCACTTGCTGTCACCATTTTGGTCATGGTGTGTAACACACCTTTAGCCAATATGCAAGAAAATTTGCACTCCAAGATCATGGAAGCTAAGGATTCAAGAATCAAAGTGACTTCAGAAACCATGAAGAATATCAGAATTTTAAAACTGCATTCATGGGAATCCACATTCTTGCAGAAAATCCTCCAACTTAGGGACACAGAGAGGAGTTGGCTGCAGAAATACCTCTACACATGCTCAGCAGTAGCCACTCTGTTCTGGGCATCTCCAACTTTAGTTTCTGTTGTCACTTTTGGTGCTTGTATACTGGTGAAAACAGAACTAACAGCAGCTAAAGTCCTCTCAGCTTTGGCTACATTTCGTATCTTACAAGAACCAATTTACAACTTACCTGAGCTCATTTCCATGATAACTCAAACAAAAGTCTCTATTGATCGAATCCAAGAGTTCATTAAGGAAGAGGATCAGAACCAATTCATGAATAGGCATGCTTCGGAAACTTCAACAGTTGCTATTGAAATCAAACCAGGTGAATATGCGTGGGAAACAAATGATCACACCCACAAGAAACCAACTATTCAAATTACAAAAAAATTAATGATAAAGAAAGGTCAGAAGGTAGCAATTTGTGGGTCAGTGGGGTCTGGCAAATCAAGCTTGCTCTACTGCATGCTTGGTGAGATTCCATTAGTTTCTGGGGCGGTTACCAAAGTCTATGGGACTAGAAGTTATGTACCTCAAAGTCCCTGGATTCAATCTGGAACTGTAAGAGAAAATATATTGTTTGGAAAGCAAATGAATAAAGACTTTTATGAAAATGTTTTGGATGGCTGTGCTTTGCACCAGGACATCAACATGTGGAGTGATGGAGATTTGACCCTAGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGGCAGAAACAACGAATTCAACTGGCAAGAGCTGTTTACAATGATTCAGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACTGGAAGTCATTTGTTTAAGAAATGTCTTATGAAACTTTTATACGATAAAACGGTTGTGTATGCTACCCATCAACTGGAATTCTTGGAAGCCGCAGATCTCATTTTAGTAATGAAAGATGGAAAAATTGTTGAGTTTGGAAGGTATAATGATCTCATAGCATGTCCCAATAGTGAACTCGTTCAACAAATGGCTGCCCATCAAGAAACAGTAAACCAAATAAATCCATGCCAAGAAGATGATCCTGTTAACTGCAAATCTTGCCACAAAAGTCAAATTGACGCTGTTGAAGAAAATATTCAAGAGACCATCATGGATTGGAAGAGAACCAGAGAAGAGGAAGCAATGACAGGACGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCAGCTTATAAAGGAGCACTTGTTCCTGTTATTCTTCTCTGTCAAATTCTCTTTCAAGTTATGCAGATGGGAAGCAATTATTGGATTTCCTGGGCCACAGAAGAGAAGGATAGGGTCAGCAAAGGGCAGCTTATGGGAACATTTATTCTTTTGTCAGGTGGCAGCTCCATCTTCATACTGGGAAGGACTGTTTTAATGGCTACAGTTTCCGTGGAGACTGCTCAGCGTCTTTTTCATGGAATGATCACATCAGTTTTCAGGGCACCTGTTTCATTTTTTGACACCACGCCTTCAAGCCGAATTCTGAGTAGGTCATCAACGGATCAAAGTACAGTAGACACAGACATACCATACAGATTAGCTGGACTAGTATTTGCACTTATCCAGTTATTGAGTATCATCATGCTAATGTCCCAGGTTGCCTGGCAAGTCATTCTCCTCTTTTTTGCAGTCCTTGCTATCTCCATCTGGTATCAGGCTTATTACATCACTACAGCCAGGGAATTAGCCAGGATGGTAGGGATTCGAAAGGCGCCAATCTTGCATCATTTCTCAGAATCAATTGCTGGTTCTGCCACAATCCGTTGTTTCAATCAAGAGAAAATATTCCTAACCAAAGTTATGGATCTAATTGATGATTATTCTCGGGTAGCCTTTCACAATTATGCCACCATGGAATGGTTGTCAGTCCGAATCAATTTTCTCTTCAATCTGGTCTTCTATTTTGTTCTCGTCATCTTGGTCACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTGCTTCAAGCTTGGGTGATATGGAATCTTTGCAATGTTGAGAACAAAATGATATCAGTTGAGAGAATATTACAATTCTCTAGCATACCAAGTGAAGCACCATTAATAATTGAAGCTTGTAGGCCTGAACCAGAGTGGCCCAGGGATGGAAAAATTGAGTTTCATAACCTTTATATACAGTATGATCCTGCTGCTCCTATGGTTCTCAAAGGTGTCACTTGCATCTTCCCAGGACAAAAGAAAATTGGAATAGTAGGTAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCCCTATTTCGAGTGGTGGAGCCTTTGGAAGGATGGATACTTATTGATGGTGTACATATTTCCAAGATTGGTCTGCAAGATTTAAGATCTAAGCTTGGTATAATTCCCCAGGATCCAACCTTGTTTCTAGGTACTGTAAGGACAAACTTGGATCCTCTGGAACAACATTCAGATCAAGAACTTTGGGAGGTTCTCAGCAAGTGCCATCTTGCTGAAATAGTAAAGCAGGATCCAAGGCTTCTTGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGTGTTGGACAAAGACAGCTAGTTTGCCTTGCCAGGCTGCTACTGAAGAAAAGAAAAATTTTGGTTCTAGATGAGGCAACTGCATCCATTGACACTGCAACTGATAATTTAATTCAGAAGACTATCAGGGAAGAAACAAGTGGATGCACAGTCATTACAGTAGCTCATAGAATTCCTACAGTCATTGATAATGATTTGGTCTTGGTCCTTGATGAAGGGAGAATTGTGGAGTATGATCAACCTTCTCAATTGCTACAGAACAACTCTTCTTCATTCTCAAAGTTGGTGTCAGAATTTTTGAGGAGATCATCCCAAAAGGTGAAAGATGCTGTTGCTTCCTTGAGTGCTCAAAAGTCTATTACTAAGAAGAAGAGCAAACAACAAAGGCGGCAGAACAAATTGAAGGCATATAACCTCTCCTCACTCTTAGAGTCCCTTCCAGATTTGAAGGCATCACAGAAACTAGGTTGTGATGATGACTTCAAACTTAATTGTAAATCTAGGCAGAAATTAATATTGAAGGAAGGACAACGGTTGTCTGCTGTTCTTAAGGATCATTTCTTCTAA 4197 0.4041 MAILDALLGTANVAFFYDNVVDAVSLPMLLLLCFNALPNVSAREQSDMEQRLLQKELEFSRDEGEVVFTNASMWSKLTFRWLNPIFNRGRIQKLELAHIPSVPHSETAESASFMLLESLRKQKLEGGSLTKAITHSIWKSLALNAILAGVNTIASYIGPLLISSFVNFLLENNSNDNSSIQYGLILAFIFFLSKTVESLSQRQWYFGAQRIGIQVRAALMALVYSKSLMMKCAGPTHGKVINLINVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGSTPSFAALAVTILVMVCNTPLANMQENLHSKIMEAKDSRIKVTSETMKNIRILKLHSWESTFLQKILQLRDTERSWLQKYLYTCSAVATLFWASPTLVSVVTFGACILVKTELTAAKVLSALATFRILQEPIYNLPELISMITQTKVSIDRIQEFIKEEDQNQFMNRHASETSTVAIEIKPGEYAWETNDHTHKKPTIQITKKLMIKKGQKVAICGSVGSGKSSLLYCMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENILFGKQMNKDFYENVLDGCALHQDINMWSDGDLTLVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVEFGRYNDLIACPNSELVQQMAAHQETVNQINPCQEDDPVNCKSCHKSQIDAVEENIQETIMDWKRTREEEAMTGRVKWSVYSTFVTSAYKGALVPVILLCQILFQVMQMGSNYWISWATEEKDRVSKGQLMGTFILLSGGSSIFILGRTVLMATVSVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIMLMSQVAWQVILLFFAVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGSATIRCFNQEKIFLTKVMDLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIEACRPEPEWPRDGKIEFHNLYIQYDPAAPMVLKGVTCIFPGQKKIGIVGRTGSGKSTLVQALFRVVEPLEGWILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHSDQELWEVLSKCHLAEIVKQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLDEGRIVEYDQPSQLLQNNSSSFSKLVSEFLRRSSQKVKDAVASLSAQKSITKKKSKQQRRQNKLKAYNLSSLLESLPDLKASQKLGCDDDFKLNCKSRQKLILKEGQRLSAVLKDHFF 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi297g00039 1398 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 69 1314 - -
Sebi297g00039 1398 SUPERFAMILY ABC transporter transmembrane region 136 439 IPR036640 GO:0005524|GO:0016020
Sebi297g00039 1398 ProSitePatterns ABC transporters family signature. 587 601 IPR017871 GO:0005524|GO:0016887
Sebi297g00039 1398 CDD ABCC_MRP_domain2 1071 1291 - -
Sebi297g00039 1398 SMART AAA_5 1099 1292 IPR003593 GO:0016887
Sebi297g00039 1398 SMART AAA_5 488 662 IPR003593 GO:0016887
Sebi297g00039 1398 FunFam ABC transporter C family member 3 1056 1308 - -
Sebi297g00039 1398 FunFam ABC transporter C family member 10 125 440 - -
Sebi297g00039 1398 FunFam Multidrug resistance-associated protein 4 442 701 - -
Sebi297g00039 1398 CDD ABC_6TM_ABCC_D1 143 432 IPR044746 GO:0140359
Sebi297g00039 1398 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 142 424 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi297g00039 1398 Gene3D - 480 711 IPR027417 -
Sebi297g00039 1398 FunFam ABC transporter C family member 5 722 1054 - -
Sebi297g00039 1398 Pfam ABC transporter 484 614 IPR003439 GO:0005524
Sebi297g00039 1398 Gene3D - 1056 1309 IPR027417 -
Sebi297g00039 1398 CDD ABCC_MRP_domain1 457 662 - -
Sebi297g00039 1398 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1073 1307 IPR003439 GO:0005524
Sebi297g00039 1398 Gene3D ABC transporter type 1, transmembrane domain 129 442 IPR036640 GO:0005524|GO:0016020
Sebi297g00039 1398 Gene3D ABC transporter type 1, transmembrane domain 724 1054 IPR036640 GO:0005524|GO:0016020
Sebi297g00039 1398 SUPERFAMILY ABC transporter transmembrane region 760 1053 IPR036640 GO:0005524|GO:0016020
Sebi297g00039 1398 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 459 685 IPR003439 GO:0005524
Sebi297g00039 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1066 1299 IPR027417 -
Sebi297g00039 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 675 IPR027417 -
Sebi297g00039 1398 Pfam ABC transporter transmembrane region 143 411 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi297g00039 1398 Pfam ABC transporter transmembrane region 762 1000 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi297g00039 1398 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 760 1036 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi297g00039 1398 Pfam ABC transporter 1090 1238 IPR003439 GO:0005524
Sebi297g00039 1398 CDD ABC_6TM_ABCC_D2 758 1048 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi297g00039 Sebi-Chr297 620676 628282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi297g00039 451 693 Calmodulin-binding Proteins AT2G36910 27.413 2.71e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi297g00039 - - mtr:25501707 2212.57