Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi297g00030 ATGGCTGCTGGAAGACATGGCGGTTACCGCGAAAACGAATTTAGGGACCGCGAGTCCAATTTGGATGTTTCGAGGCGCGGTCTCACGAATTCGAAAGAAGAGTATGATCAGGTTAGGAATGGTGGCCGTGATGTTGTGAGGGGTGGGAGCAGGGATTCGAGAGATAGGATTAGGGTGAGGCAGAAGGAGATTCGGGAAAGAGAAGCCGTCAGTAATGGCAATTACCGATCCTCTTCGAGTCGGAGTAACTCCGGAAGCAGTGGTGGACTTGGCCCTCGCCGGTGTGGTTTTTCTGCCAAGACTTTGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGATGCTATTGAATCAGAGTCAGGGGTGAAAGGTGCTGAGGTTGCCATGTTTGAAGGAAACAGTACTCTGTCGCCACCACCACAGGAGAGGAAAAGGAAATTTTCACCCATAGTGTGGGATCAGGATGACAAGGAAGTGAAGGAGTCATCCAAAGTTAGGGTTTCCACTACATCAGTGACTGCTCTTCCTCCTCTGCGTCAGCTGCCAAAAGAAATGCGTCCTGCTAGGAACAGAGAAACTGAGACTCCTGAGTTGCGGGCAGCAGCTAAGGTTACCTTGCCCTCTCCTTCAAGTTTGCAGTCCTTGTCTCCAAAGCAGACTTGGGGTAATGATCAGGAAGCTGAGCAGCCAGAAGAAGGTGAAGATTATGTTCCAACACGTAATATATCATCCTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGATGAGGGTGAAATCCTTGATGATGAGGAAATGCCTAAAAGGAGGAGGAGGCTGTCTCCTGAGTTGTTGGAGACTAGGGTGAGGAACAAGTTATTGAGCCCAGATGAATCTAAAATAGAAAGTTCTGAAGGAGCTAGAGCCAAATCATCAGGATCTGAAGAAAGAGGAATTATCCATGGGAGAACATCCAGTGGTGATGATCATCCTGGTATTGAATCAGAGAATGATGACTATATGGAGATTGATGCTCACGGTATGAAAAGTGACACCAGTATTAGTCACTCAGATACAGAATCTGAAGATGAAGATGATAGGCGGGAGACTCCAGAACCTCCAGCTCCACCTCAAAGAACGGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAATAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCTAGAGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAGGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGATTAATGGAGGCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAGTGCTTAATGATCCAGCTTTTAAAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTACTTCTAAATAATAGGGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCCTTGAAACCATATACGCACCTGGTGGTTACACTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCTATTGACATGTGGTCTCTTGGTTGTATAATGGCTGAACTATTGGCTAAGGAACCACTATTTAATGGGAAAACGGAATTTGATCAACTTGACAAGATTTTCAGGATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAACTTTGTCAAGCACCAGTATAATCTCCTCCGTAAAAAGTTTCCTGCCACCTCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTGACTTATGACCCTGAAAAGCGGATCACAGCTGAAGCTGCTCTCAATCATGAATGGTTCCGTGAAGTTCCTCTCCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGGATGCGGAGAATATTGAAGAGCCCGGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCAGGGACCGGTGGAATTTTTGGCTAG 2208 0.452 MAAGRHGGYRENEFRDRESNLDVSRRGLTNSKEEYDQVRNGGRDVVRGGSRDSRDRIRVRQKEIREREAVSNGNYRSSSSRSNSGSSGGLGPRRCGFSAKTLDREPGELSSESGSDDAIESESGVKGAEVAMFEGNSTLSPPPQERKRKFSPIVWDQDDKEVKESSKVRVSTTSVTALPPLRQLPKEMRPARNRETETPELRAAAKVTLPSPSSLQSLSPKQTWGNDQEAEQPEEGEDYVPTRNISSSRWAAGDNSPGDEGEILDDEEMPKRRRRLSPELLETRVRNKLLSPDESKIESSEGARAKSSGSEERGIIHGRTSSGDDHPGIESENDDYMEIDAHGMKSDTSISHSDTESEDEDDRRETPEPPAPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLKGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLAKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRILKSPDPLEEQRRKELQQGESGTGGIFG 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi297g00030 735 MobiDBLite consensus disorder prediction 187 201 - -
Sebi297g00030 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
Sebi297g00030 735 MobiDBLite consensus disorder prediction 1 377 - -
Sebi297g00030 735 PANTHER CELL DIVISION PROTEIN KINASE 387 686 - -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 265 369 - -
Sebi297g00030 735 Gene3D Transferase(Phosphotransferase) domain 1 472 713 - -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 8 70 - -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 71 89 - -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 209 229 - -
Sebi297g00030 735 SUPERFAMILY Protein kinase-like (PK-like) 381 686 IPR011009 -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 710 735 - -
Sebi297g00030 735 FunFam cyclin-dependent kinase G-2 isoform X1 374 471 - -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 149 167 - -
Sebi297g00030 735 Gene3D Phosphorylase Kinase; domain 1 374 471 - -
Sebi297g00030 735 MobiDBLite consensus disorder prediction 710 724 - -
Sebi297g00030 735 FunFam Cyclin-dependent kinase G-2 472 711 - -
Sebi297g00030 735 SMART serkin_6 389 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi297g00030 735 ProSiteProfiles Protein kinase domain profile. 389 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi297g00030 735 Pfam Protein kinase domain 389 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi297g00030 735 CDD STKc_CDC2L1 383 680 IPR045267 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi297g00030 Sebi-Chr297 475146 478383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi297g00030 380 726 Core Cell Cycle Gene Families AT5G10270 45.067 2.06e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Sebi297g00030 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi297g00030 K08818 - gmx:100792524 1137.87