Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi297g00003 ATGGGACATGGAGTGCCTATTATTCTTCAATGCAAAGCAACAGAAAATCCAAAATTACAACCACCAAACAGGAGTGAAGTGAACAGAGAAATCAATGTCAGGTTGTTTGATACATCTGGTGGCAGTGGTTGTTCTAGGTCTGAGCTAATAGATGCTTCTTCATCAAGGAGCTCAAAATCAGCTTCCATCAGTTCATCATCAAATAAGGATAGCAAAACATCAATAATTACTTTTGAAAGTTCCCAAGATGATTCCAGTGCTAAAAAAGAATTATCTAAAGAGGAGCCAGTTGAAACTTCTCATGCACCAGAGCTCACTCTAAAGCTTGGTAAAAGGTTGTACTTTGAGGATGTTGAAGACTGTGGCCTTGACCTTTCATCAGCTAAAGATTACCATCGCAAACATAGAGTTTGTGAAAGTCATTCCAAATCCCCTAAGGTGATTATAGCTGGTTTGGAACGTCGATTTTGCCAGCAATGTAGCAGGACTGCTACAAATTTAGCCTGGCAAGATCTACATAGCAGCAAGCTTCCCCAGACAAAAGATTTTCTCTTGAAACCTGCAAAAGCCAATAATGAGATACCAAGTATTGTCACTATGCTTTCTGGTGATTCCAACGTCCCTTTTACATCCAAAGGTGTTGCAACCAAGGGTACTAGTCCAGATATAGAAGACTCCATCACCTCTTCTGATCCAAATGCTACACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAAACAATTCATGGGGTTCATATGAGACTAAATCCATTTCTCTAGAACACTCCAATCACACAACCGGTACCTCTCAGCCCATGATACATACAACGGGTCAGCGCTTTCCTCCTACTACATCTGAATATTGGCATAGTGATCAACAAGTGAATTGCGGCACATGGATCTCATACTCAAATTGTGATGATAGTAATCGCTTTCATGAATTTCAACTGTTCAGAGAACCTTATGAGTCTGGATTTCCTTATGACCAGTTGGATTAA 999 0.4034 MGHGVPIILQCKATENPKLQPPNRSEVNREINVRLFDTSGGSGCSRSELIDASSSRSSKSASISSSSNKDSKTSIITFESSQDDSSAKKELSKEEPVETSHAPELTLKLGKRLYFEDVEDCGLDLSSAKDYHRKHRVCESHSKSPKVIIAGLERRFCQQCSRTATNLAWQDLHSSKLPQTKDFLLKPAKANNEIPSIVTMLSGDSNVPFTSKGVATKGTSPDIEDSITSSDPNATQDFHRALSLLSNNSWGSYETKSISLEHSNHTTGTSQPMIHTTGQRFPPTTSEYWHSDQQVNCGTWISYSNCDDSNRFHEFQLFREPYESGFPYDQLD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi297g00003 332 Gene3D - 117 174 IPR036893 GO:0003677|GO:0005634
Sebi297g00003 332 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 94 162 IPR044817 GO:0003677
Sebi297g00003 332 MobiDBLite consensus disorder prediction 38 82 - -
Sebi297g00003 332 Pfam SBP domain 118 163 IPR004333 GO:0003677
Sebi297g00003 332 ProSiteProfiles Zinc finger SBP-type profile. 113 190 IPR004333 GO:0003677
Sebi297g00003 332 SUPERFAMILY SBT domain 117 163 IPR036893 GO:0003677|GO:0005634
Sebi297g00003 332 MobiDBLite consensus disorder prediction 1 103 - -
Sebi297g00003 332 MobiDBLite consensus disorder prediction 83 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi297g00003 Sebi-Chr297 26629 29471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi297g00003 103 292 SBP-box Gene Family AT5G43270 30.000 7.83e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi297g00003 SBP 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi297g00003 - - gmx:100781289 324.709