Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00078 ATGAAGCCCTTTTGCAGATTGTTGATTCTCTTAGCGCTTGTTGCTCTCGTGGAATCTTCATGCAGCAACAGTACTGGTGACCAGGACCTGGTGTCAAAGGCCTTTCAATCTGTCTCTGGATTCAACTCTTCCTGGTTCCAACCAAGAGGTTCCAACTGTTCAAAGGCTGAGATTAGGTCGATAAAGCTTCCTTTCAGAAACTTGAGTGGGAGTATCTCATGGAGGTATCTGAGGAACATGTCCAAGTTGGAGATTCTCGATCTGTCTGGGAATTATCTGCAAGGCCAGGTTCACCAATCTGATTCAGCTCTCTGGTTTTTCAAACCTGAAAAGTCTGGACCTTTCCCACAACAAGCTTGGAACTTTGCCTCTGGGTTCCAAAATCTCACCAACCTAACCTACCTCGATCTCTCCAGCTGCAACATCAAAGGAAACGTTCAAAAAATTTGGAAAATCAGCATTCATTCACGCCGAAAGAAGAGGCAATTGGCGAAAAGGAACAAATGGGCAATCTCCAAACCGATGATTCCATTGACCATTAAGATGGAGAAATCTGGGCCGTTCGCGTTCGAGACAGAGTCAGGGACATCATGGGTGGCTGACCTTAAGGAACCGTCTTCAGCACCAGTGGTGATGTTCGAGAAGCCGCTGATGAACCTCACCTTCGTCGACCTCATGGCTGCCACGTCACACTTCGGGAAAGACTCTCAACTCGCAGAGGGTAGGTGTGGACCCGTCTATCGAGCTGTACTGCCTGGAGACATCCACGTGGCAATCAAGGTCCTTGAAAACGCTAGAGACGTTGATCATGATGACGCTGTCTCTACCTTCGTTGACCTCTCCCACTTCAAGCACCCCAATCTCTTGCCTCTTTCCGGTTACTGCATTGCAGGGTATTTGCAAAAATGA 909 0.4796 MKPFCRLLILLALVALVESSCSNSTGDQDLVSKAFQSVSGFNSSWFQPRGSNCSKAEIRSIKLPFRNLSGSISWRYLRNMSKLEILDLSGNYLQGQVHQSDSALWFFKPEKSGPFPQQAWNFASGFQNLTNLTYLDLSSCNIKGNVQKIWKISIHSRRKKRQLAKRNKWAISKPMIPLTIKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLTFVDLMAATSHFGKDSQLAEGRCGPVYRAVLPGDIHVAIKVLENARDVDHDDAVSTFVDLSHFKHPNLLPLSGYCIAGYLQK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00078 302 Gene3D Ribonuclease Inhibitor 22 165 IPR032675 -
Sebi295g00078 302 SUPERFAMILY RNI-like 59 144 - -
Sebi295g00078 302 SUPERFAMILY Protein kinase-like (PK-like) 209 296 IPR011009 -
Sebi295g00078 302 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 149 298 - -
Sebi295g00078 302 FunFam Putative LRR receptor-like serine/threonine-protein kinase 193 301 - -
Sebi295g00078 302 Gene3D Phosphorylase Kinase; domain 1 192 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00078 Sebi-Chr295 925980 927581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00078 57 295 Receptor kinase-like Gene Family AT5G07280 26.370 1.88e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Sebi295g00078 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00078 - - gmx:100778920 248.825