Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00072 ATGGGAATGAGATGCAACACATTTGGATTTTGGTTTAGAATTTATATTTGCTTGATATCTGTGTGGGGAATCCAAGAGTGTTGGTCGCTTAATGATGAAGGATTGGCTCTGTTGGAGTTCCGGACAAAAATAACTTCTGATCCTTATGTTGCCTTGGCAAATTGGAATCCAAATGATTGTGACCCTTGCAAGTGGTCAGGTGTTCATTGTGTCGATGGTAAAGTGCAAATGCTGGACCTAAACGGGCTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTGCTCACTTAAAATCTCTTGTGTTGAGCAAGAACAACTTCTCTGGCACCATTCCCAAAGAACTTGGAGATCTAGGCAAGCTGGAGTTGTTGGATTTAAGGGAGAATAACTTGTCAGGAAGCATTCCAGCAGAAATTACCAGGATGTTATCGCTAAAACACTTGTTCAAGAATGACCATGAAGGGAAATTCTGCCATGTTCTACCTAGTTCTAATGAGCTAGAGATTATCCAAAATGCACCAAATCTTGTCAATTCTGCACGTCGTAAGTTACTTGATCAGACAAGTAACATGGCAGCTGCACCTTATAGTGGTGGACCTACTATAGAGTTCAGTTCTGTTCCAATTACAGTGAGTAGTGGATCTTTCCCAGCTGTGCCAGATGCCAATAAAAAACAGAATCAGTTACCTTCACCACTGCCTTCACCTCCTGATCCTCCACATGATGCTTCTGATGGAAATCAAACAAGTCAACAACATTCACCTAATGGAAGTGGTGCTTCTGGAAAGTTGTGGAAGTACATAATTATTAGTATAGCTGTGGTTGTGTTGGTCATTGTTATCATAATTCTTCTTTGCATTTGGCGAAAACGAGCAGCAAAAATAATAACCCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTGCCCAACTTGAATAGAGCAGAACTAGAGACAGCTTGTGAGGATTTCAGCAATATTGTTATTAATTTTGATGCATGCACCATATACAAAGGAACACTGTCCAGTGGGGTTGAGATTGCTGTTGTTTCTACTCTGATTACTTCTTCCCAAGATTGGTCTAAGAGCATGGAGATGAACTACCGGAAAAAGATTGATACTTTGTCCCGCATAAACCATAAGAACTTCATTAATCTTATTGGGTATTGTGAAGAAGAAGAACCATTCACAAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAGTCTATTTGAGCATTTACATGTTAAGGAAATTGAACGTCTTGATTGGAGTGAAAGGGTGAGGATCATAATGGGCACTGCTTATTGTCTTCAGTATATGCACCATGATCTGAATCCACCCATAGCTCATAGCAAGCTTACTTCAAGTATGGTATTATTAACAGATGATTTTGCCGCCAAGATTGCAGAGATCACTTTTGGAAATGTTGTATCACCAGCTAAGACAAGTGGAGGTGATTCAAAGAAATCTGAGTCACCACCCCGTGATGATCTTGCAACCAATGTCTATGACTTTGGAATATTGCTGCTTGAAATCATTTCTGGGAAATTGCCTTGTTCTGAAGAAGAAGGCAATCTTGTGAATTGGGCTGCTGAGTACTTAAATGACAAGAAAAGCATCAGCTATATGATTGATCCATCCCTGAAGTCTTTCAAGGATAATGAACTTGATGTCATATGTGAGGTGATCAAAGATTGTATCCAACCGGAAACAAAGTTAAGACCCACAATGAGGGACATAACTTCCAAATTGAGGGAAGTGATTAGTGTGTCACCTGAGCAAGCGGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTGTCAGTGGAGGCCACTTGA 1875 0.4091 MGMRCNTFGFWFRIYICLISVWGIQECWSLNDEGLALLEFRTKITSDPYVALANWNPNDCDPCKWSGVHCVDGKVQMLDLNGLSLEGTLAPELGKLAHLKSLVLSKNNFSGTIPKELGDLGKLELLDLRENNLSGSIPAEITRMLSLKHLFKNDHEGKFCHVLPSSNELEIIQNAPNLVNSARRKLLDQTSNMAAAPYSGGPTIEFSSVPITVSSGSFPAVPDANKKQNQLPSPLPSPPDPPHDASDGNQTSQQHSPNGSGASGKLWKYIIISIAVVVLVIVIIILLCIWRKRAAKIITPWKTGISGQLQKAFITGVPNLNRAELETACEDFSNIVINFDACTIYKGTLSSGVEIAVVSTLITSSQDWSKSMEMNYRKKIDTLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGSLFEHLHVKEIERLDWSERVRIIMGTAYCLQYMHHDLNPPIAHSKLTSSMVLLTDDFAAKIAEITFGNVVSPAKTSGGDSKKSESPPRDDLATNVYDFGILLLEIISGKLPCSEEEGNLVNWAAEYLNDKKSISYMIDPSLKSFKDNELDVICEVIKDCIQPETKLRPTMRDITSKLREVISVSPEQAVPRLSPLWWAELEILSVEAT 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00072 624 MobiDBLite consensus disorder prediction 244 259 - -
Sebi295g00072 624 Gene3D Ribonuclease Inhibitor 29 208 IPR032675 -
Sebi295g00072 624 Gene3D Transferase(Phosphotransferase) domain 1 413 605 - -
Sebi295g00072 624 FunFam Inactive receptor-like serine/threonine-protein kinase 304 412 - -
Sebi295g00072 624 SUPERFAMILY L domain-like 29 164 - -
Sebi295g00072 624 Gene3D Phosphorylase Kinase; domain 1 303 412 - -
Sebi295g00072 624 Pfam Protein tyrosine and serine/threonine kinase 344 593 IPR001245 GO:0004672|GO:0006468
Sebi295g00072 624 ProSiteProfiles Protein kinase domain profile. 252 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi295g00072 624 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Sebi295g00072 624 MobiDBLite consensus disorder prediction 222 259 - -
Sebi295g00072 624 SUPERFAMILY Protein kinase-like (PK-like) 343 593 IPR011009 -
Sebi295g00072 624 PANTHER PROTEIN MALE DISCOVERER 2 14 622 - -
Sebi295g00072 624 FunFam Nuclear pore complex protein NUP107 30 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00072 Sebi-Chr295 872164 876412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00072 1 593 Receptor kinase-like Gene Family AT5G16000 27.066 7.07e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sebi295g00072 PK_Tyr_Ser-Thr 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00072 - - gmx:100788002 904.82