Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00071 ATGTCAGAAGGATATGAGGAAACTTCATCGGGATCTTCCCAGAAATGTTCTTCCTTTGACTTGAATGAAGAAGCTAGCTGCAGTGAAGATAATAAGGATGAGGCCTGTGAGCTCAGACATGAAGAGAAAGCAAATATTGATGATGAGGGCAGTTCAGCAGCAAATAGAAGCAGTAGCAGTACATCAAATTCAAGAGGAACGGTTAGACAATATGTTAGATCCAAGATGCCTCGCCTTCGCTGGACTCCTGACCTTCATCTCTCCTTTGTGCATGCTGTTGAAAGGCTCGGAGGTCAAGAGAGAGCAACACCCAAGATGGTGCTTCAGCTAATGAATGTAAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTACCGAAGCAAGAAACTTGACGAGCCCGGCCAAGTACTAAGCCAAGAAGTAGGTCGTAGATCTCAGATATTCCATCATCAACATTTTAAGATGGGAAATGGTGGAATTATTCTAGCAAGTAATTTTAACCATCACAGTACTCATCATTTCCAACCCTCCTTCTCCCTTTCACGTTCACATACGGACTCCTCAAGGCACCAGCATTGGTATTACAATGATCATCAACATTTAAGAATGCCAATAGCTTCAAACCAATTAGTTGCACCAAAGGATACAAATACAATTGCAGCCGTGAGACCAATTACCCAATTTGTTGAAGAGAAAGGTTGGCCTAAAACTAATTGGTCATCACAAGCTGTTGAGCCAACAGAACGCATCACAGAATATCTATCGAGCTCCAATGAACCTCGCAACTATTCCGCTAGTTTTAACCTCCTACAATTTGATCCCCCATTTCGGATTAAGTTGAATCAAGAGAAAGACGAGCAACAGTTGCCTGAACTGCAACTGGGTTTGAGTCACACAGATATTGGAACCGATGACCGTTGCAGAGAAACCCAAGAAATTAGCACCAAGTTATCACTTTCTTAG 972 0.427 MSEGYEETSSGSSQKCSSFDLNEEASCSEDNKDEACELRHEEKANIDDEGSSAANRSSSSTSNSRGTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKMVLQLMNVRGLSIAHVKSHLQMYRSKKLDEPGQVLSQEVGRRSQIFHHQHFKMGNGGIILASNFNHHSTHHFQPSFSLSRSHTDSSRHQHWYYNDHQHLRMPIASNQLVAPKDTNTIAAVRPITQFVEEKGWPKTNWSSQAVEPTERITEYLSSSNEPRNYSASFNLLQFDPPFRIKLNQEKDEQQLPELQLGLSHTDIGTDDRCRETQEISTKLSLS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00071 323 MobiDBLite consensus disorder prediction 1 69 - -
Sebi295g00071 323 SUPERFAMILY Homeodomain-like 75 131 IPR009057 -
Sebi295g00071 323 NCBIfam myb-like DNA-binding domain, SHAQKYF class 77 132 IPR006447 GO:0003677
Sebi295g00071 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 56 185 IPR046955 GO:0003700
Sebi295g00071 323 Gene3D - 76 133 - -
Sebi295g00071 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 133 IPR017930 -
Sebi295g00071 323 MobiDBLite consensus disorder prediction 25 49 - -
Sebi295g00071 323 MobiDBLite consensus disorder prediction 50 69 - -
Sebi295g00071 323 MobiDBLite consensus disorder prediction 1 24 - -
Sebi295g00071 323 FunFam Myb family transcription factor 75 133 - -
Sebi295g00071 323 Pfam Myb-like DNA-binding domain 79 129 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00071 Sebi-Chr295 849121 850731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00071 68 134 G2-like Transcription Factor Family AT2G42660 82.090 1.20e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi295g00071 Myb_DNA-binding 4.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00071 - - gmx:100787474 338.576