Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00064 ATGGCGGAAGTGCGAAGAGGACAAGAGAGTAGTCAGGGGATTAAGCTATTTGGCGCAACAATTACATTGCATGGTGGGGAAGTAAATGACGGGAAAAAAGGAAACGGCGAAGATCAGACGGTGGAGAAGAGATCAGAGAAGATCATAGCGTGCCCAAGATGCAAGAGCATGGAAACCAAATTCTGTTACTTCAACAACTATAACGTGAATCAGCCAAGGCATTTCTGCAAGAGTTGCCAGAGGTACTGGACTGCTGGTGGGGCCCTCCGGAACGTGCCAGTGGGGGCCGGCCGGCGGAAGGCCAAGCCGCCGTGTCGTGGGGAAGGTGGATTCCCGGACGGTTGCTTCTATGAAACTTCAGATGATGATGAGCAGAGATTTGGGTTGGAGCAGGACAAGTGGCATGTTGCTACGCCTCAGAGTGATTTCCGGCAGGTTTTTTCCGGCCAAGCGGCGGAGGACGACCTCAGGTGGTTAGCCTTCTTGTGA 489 0.5297 MAEVRRGQESSQGIKLFGATITLHGGEVNDGKKGNGEDQTVEKRSEKIIACPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVPVGAGRRKAKPPCRGEGGFPDGCFYETSDDDEQRFGLEQDKWHVATPQSDFRQVFSGQAAEDDLRWLAFL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00064 162 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Sebi295g00064 162 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Sebi295g00064 162 PANTHER CYCLIC DOF FACTOR 2 35 102 IPR045174 GO:0003700|GO:0006355
Sebi295g00064 162 Pfam Dof domain, zinc finger 47 102 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00064 Sebi-Chr295 712213 712701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00064 9 147 C2C2-Dof Transcription Factor Family AT1G29160 54.088 5.59e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sebi295g00064 zf-Dof 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00064 - - gmx:100820604 209.149