Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00028 ATGGGGTCTGAAGACAAAGATGGTGAACAACACTCACTTGGTATAGGCTTTAAGGTTATGCTGGCTGCAGCTTTCTCTTTATTTGGCATAGTCTTGTTCACTATATTCCTCCTTTTTTGTGCAAAATATCTCATAAGGCGCCAACAGAGAAGACGTCAAATTCACCTTCTTAATCAGATCAACATTCAAATTGCACCAATTGATGTGAGTTCAGTGGAGCCACCCAATTGTGGCCTTCACCCTTTGATCATAGCCTCACTGCCTAAACTACTGTACAACCAAACGGACCACTTCAGACAATGTGAAGAAGGAGCTACAGAGTGCTCTGTTTGCTTAGCCACTATTCTGGAAGATGCAACTATTAGGTTGCTACCAAATTGTAAGCACATTTTTCATGTTGATTGTGTTGATAAATGGTTTAGTTCTAACACCACATGCCCAATTTGCCGCACCGTGGCTGAACCCAGGGTCCAGGTCCAACCCACAGCACCACCTGTAGACGATGAGCCACAAGATGGTAGTGAATTGGGGAAGGTGGGATGTTCAGGCTTGAGAATAGGATCTTTTCATAGAATGGTTAGTGGCAGGGAAAGATCATTCAGAAGGACTCAAAGCTCTCATGACTCTGCCATAGAAGATATAGAAGGACATTAA 654 0.4327 MGSEDKDGEQHSLGIGFKVMLAAAFSLFGIVLFTIFLLFCAKYLIRRQQRRRQIHLLNQINIQIAPIDVSSVEPPNCGLHPLIIASLPKLLYNQTDHFRQCEEGATECSVCLATILEDATIRLLPNCKHIFHVDCVDKWFSSNTTCPICRTVAEPRVQVQPTAPPVDDEPQDGSELGKVGCSGLRIGSFHRMVSGRERSFRRTQSSHDSAIEDIEGH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00028 217 Pfam Ring finger domain 107 150 IPR001841 -
Sebi295g00028 217 MobiDBLite consensus disorder prediction 196 217 - -
Sebi295g00028 217 SMART ring_2 108 149 IPR001841 -
Sebi295g00028 217 SUPERFAMILY RING/U-box 86 161 - -
Sebi295g00028 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 158 IPR013083 -
Sebi295g00028 217 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Sebi295g00028 217 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 21 163 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00028 Sebi-Chr295 378100 378753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00028 1 217 C3H Transcription Factor Family AT2G42360 34.940 1.84e-34 121