Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00012 ATGGCAGGTGCTCTTGTGGGTGGAGCTTTTCTGTCTGGTTTTATCAATGTTGTCTTCGATCGGCTCTCTTCGCCTGAGGTTCTCAGTTTGATTCGATCAAAGAAGCTTGACGAGGGTTTGCTTCTAAGGTTGAAGAATACTCTGTATGCTGTTGAAGCTGTGCTTAATGATGCAGAGCTTAAACAGATCAAAGACTCGGCCGTCAACAAGTGGCTCGATGACCTCAAAGATGCTGTCTATGTCGCTGATGACATCTTGGATCATGTTTCTACTAAAGCTGCAACTCAAAGGGAGGTTAGTAGTAACTTCTTCTCTCGCTATTTCAATTTTCAAGACAGGGAGATGGTTCATAAGTTGCATGACATAGTTGGCAGACTAGAATCTATTCTCAACCTCAAAGATATTCTTGGTCTTAAAGAGATTCCTAGGGACAACTTTTCATGGAGAATTCCATCAACCTCTCTTGCAGATGGATCTAACATATATGGTAGGGACAAAGACAAAGAGTCCTTACTCAAATTATTGTTAGATGATGATACCAAAAACAGTGATGGTAAAATATCTGTGATCCCTATTGTGGGCATGGGTGGGGTTGGAAAAACCACTTTAGCCCAATTGGCTTTCAATGATGACAAAGTAAAGCAGAAATTTGAATTTCAAGCATGGGCTTGTGTTTCTGAAGAATTTGATATTCTAAAGGTTACAAAGATGATCACTGTGGCGGTAACAAAAAGTTCTTGTAACATGAATGATATCAATTTACTTCAGCTTGATTTGAAGGAAAAGGTCACTGAAAAGAAATTCTTATTAGTTCTGGATGATGTGTGGAGCGAGGATTATGATAAATGGAATTTTCTTATAAAACCTCTTCAGTACGGGGCTAAAGGAAGTAAAATTGTTGTAACAACCCGCAGTGAAAAAGTTGCTCGTACTGTTCAAACTGTTCAATTTTTCAGCCTAAAAATGTCAGATGAAGATTGTTGGTCAGTGTTTGCGAGCCATGCATGCTTTTCATTAGAGTCTGGGGATAATAGGGCTCTTGAAAAGATTGGCAGAAAGATTGCAAGAAAGTGTAAGGGATTACCTTTAGCTGCACAATCACTTGGAGGCTTACTGCGGGCAAAACATGATATCAGGGACTGGGAAGGTATAAAGACATTACCAGAATCATTGTGTAACTTGTACAATCTACAAACACTAATGCTGGGAGATTGTACTAAGCTGGCTATGCTACCGAGTGGCATGCAAAATCTTGTGAACTTGCGTCACCTTGATATTAGCGAAACTAATTTAGGAGAGATGCCTAGAGGAATGAGCAAGTTAAACCATTTGCAGCATTTAAGTCATTTTGTTGTGGGCAAACATGAGGAGAACGGAATCAAGGAATTGGGAAAACTTTCAAACCTTCATGGATCACTTGAGATAAAGAAATTGGAAAATGTTACCAGCATTATTGAAGTGTCAGAGGCAAGGATGATGGATAAGAAGTACCTTAACGAATTAAAATTTCATTGGTCTGAAGGGGATGATTTTACCAATTCACAAAGTGAAATGGAAATACTTGACAAGTTAGAGCCTCACAAAAACCTGAAAAGTCTAGAGATACAAGGCTACAGAGGCACGAAATTTCCGGAATGGGTGGGTCATCCTTCTTTCCACAATATGACCAATCTAACCCTATCTAAATGCAATAATTGTTGTATGCTTCCTTGTCTTGGACAACTACCCTCCCTTAAGAGGCTAGTTATTTGGGGATTGAATGGAGTGGAGATTATTACCCCTGATTTTTCAAGAAGGATGATCCTTCTTTTTCAGGGACAACCCTTTCCCGTCCTTGAAGATCTGCAATTTCGTGACATGGCATGTTGGGAGGTGTGGTGTCCTTTTGAGTCAGATGCTTTTCCTAAGTTAAAGCGGCTTCAAATAAAGGATTGCCCCAAATTAATGGGAGATTTGCCAACTCACCTTCCTGCTTTGGAAGTACTTGGCATTCATGGATGCCAACAACTTGCTTCTTCTTCTCTCCCAAGGGCTCCCTCCATCCTCGAATTAGAGATAATTGAATGCAATAAACTGGCCGTGCAAGAGCTACCCCTTTCACTGAGAGATCTAAAAATTAAAGGACGACATGACATGGAGTCCATATTTAAAGCCATCACTCAATCAACTACTCTTCAATTCTTACAGATCGAGAATTGTTCCTCTGCCACATCATTTCCAGGGAATTGTTTACCCACGTCACTGAAGGAATTAGGTATCAAGAATTTTAGAAAACTTAAATTCCCAAAGCAAAACCAACACCAGTTACTTGAATTACTGAATATATGGAGCAGTTGTGATTCTCTCAAATCCTTCCCATTGGAAAGCTTTCCAAATCTCGGTGATCTTATCTTCTGTAAGTGTGAAAATCTGGAACGTCTTTCGGTTTCAGAGTCACCTCTTCAAAATCTCCGTATTTTTGAAGTCCTTAACTGCCCCAGTTTTGTATCATTTCCAGAAGGAGTTTGCCTGCGTCCAGCTTGA 2523 0.3995 MAGALVGGAFLSGFINVVFDRLSSPEVLSLIRSKKLDEGLLLRLKNTLYAVEAVLNDAELKQIKDSAVNKWLDDLKDAVYVADDILDHVSTKAATQREVSSNFFSRYFNFQDREMVHKLHDIVGRLESILNLKDILGLKEIPRDNFSWRIPSTSLADGSNIYGRDKDKESLLKLLLDDDTKNSDGKISVIPIVGMGGVGKTTLAQLAFNDDKVKQKFEFQAWACVSEEFDILKVTKMITVAVTKSSCNMNDINLLQLDLKEKVTEKKFLLVLDDVWSEDYDKWNFLIKPLQYGAKGSKIVVTTRSEKVARTVQTVQFFSLKMSDEDCWSVFASHACFSLESGDNRALEKIGRKIARKCKGLPLAAQSLGGLLRAKHDIRDWEGIKTLPESLCNLYNLQTLMLGDCTKLAMLPSGMQNLVNLRHLDISETNLGEMPRGMSKLNHLQHLSHFVVGKHEENGIKELGKLSNLHGSLEIKKLENVTSIIEVSEARMMDKKYLNELKFHWSEGDDFTNSQSEMEILDKLEPHKNLKSLEIQGYRGTKFPEWVGHPSFHNMTNLTLSKCNNCCMLPCLGQLPSLKRLVIWGLNGVEIITPDFSRRMILLFQGQPFPVLEDLQFRDMACWEVWCPFESDAFPKLKRLQIKDCPKLMGDLPTHLPALEVLGIHGCQQLASSSLPRAPSILELEIIECNKLAVQELPLSLRDLKIKGRHDMESIFKAITQSTTLQFLQIENCSSATSFPGNCLPTSLKELGIKNFRKLKFPKQNQHQLLELLNIWSSCDSLKSFPLESFPNLGDLIFCKCENLERLSVSESPLQNLRIFEVLNCPSFVSFPEGVCLRPA 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00012 840 FunFam Probable disease resistance protein At1g61300 149 316 - -
Sebi295g00012 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 385 IPR027417 -
Sebi295g00012 840 Pfam NB-ARC domain 181 385 IPR002182 GO:0043531
Sebi295g00012 840 SUPERFAMILY L domain-like 635 832 - -
Sebi295g00012 840 Gene3D Ribonuclease Inhibitor 493 693 IPR032675 -
Sebi295g00012 840 SUPERFAMILY L domain-like 383 698 - -
Sebi295g00012 840 Gene3D - 144 317 IPR027417 -
Sebi295g00012 840 PRINTS Disease resistance protein signature 358 372 - -
Sebi295g00012 840 PRINTS Disease resistance protein signature 189 204 - -
Sebi295g00012 840 PRINTS Disease resistance protein signature 654 670 - -
Sebi295g00012 840 PRINTS Disease resistance protein signature 262 276 - -
Sebi295g00012 840 Pfam Rx N-terminal domain 10 105 IPR041118 -
Sebi295g00012 840 Gene3D Ribonuclease Inhibitor 376 492 IPR032675 -
Sebi295g00012 840 Gene3D - 28 122 - -
Sebi295g00012 840 PANTHER DISEASE RESISTANCE PROTEIN RP 386 690 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00012 Sebi-Chr295 201965 205152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00012 156 308 WRKY Transcription Factor Family AT4G12020 27.545 3.18e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00012 - - adu:107476306 700.664