Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00011 ATGGAGATCAACCAAAGGCATGGAGCTGAAGAACTGTTTCAAGCTCAGACCCATTTATATAAATATACTTACAGTTTCATTGCTTCCATGTGCCTGAAAAGTGCAGTTCATTTGGGAATACCAGACATAATCTATAACCATGGCCAACCCATTACTATCCCTGAGTTGGTCTTGGCACTTCAGATAGACCCTGCTAAGTCTGGTTATGTATATAGGCTCATGCGTTTGCTGGTGCATGCTGGCTTCTTTGCTACAACCAAAACCAAGGTTGTAAAAGATGACGAGAAGGAAGAAGTAGGCAATGTGAAATTTGTTGGAGGTGACATGTTTCAGTCCATTCCTTCAGCAGATGCCATTCTTCTCAAGTTAGTCTTGCATGCTTACAGTGATGAAGAGTGCGTGAAGGTACTGAAGAAGTGCAGAGAAGCTATTTCAAACGAGGGCAAGGGAGGGAAAGTAATTATCATAGACATAGTGATTGGTGAGAAGAATGATGATAAGGATGAATTGACGGAAGCAAAGCTCTTCTTTGATCTGTTAATGATGGTTGTGGTCAGTGGAAGGGAGAGAGAAGAAAAAGAATGGAAGAAACTCTTCTTGGAAGCTGGATTTAGTCACTACAAAATAACACCCATCTTTGGTATGAGGTCACTTATTGAAGTTTATCCTTAA 672 0.4077 MEINQRHGAEELFQAQTHLYKYTYSFIASMCLKSAVHLGIPDIIYNHGQPITIPELVLALQIDPAKSGYVYRLMRLLVHAGFFATTKTKVVKDDEKEEVGNVKFVGGDMFQSIPSADAILLKLVLHAYSDEECVKVLKKCREAISNEGKGGKVIIIDIVIGEKNDDKDELTEAKLFFDLLMMVVVSGREREEKEWKKLFLEAGFSHYKITPIFGMRSLIEVYP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00011 223 PANTHER O-METHYLTRANSFERASE 11 87 IPR016461 GO:0008168
Sebi295g00011 223 Gene3D Vaccinia Virus protein VP39 90 223 IPR029063 -
Sebi295g00011 223 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 222 IPR029063 -
Sebi295g00011 223 Gene3D - 1 89 IPR036388 -
Sebi295g00011 223 FunFam Coniferyl alcohol 9-O-methyltransferase 2 101 - -
Sebi295g00011 223 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 223 IPR016461 GO:0008168
Sebi295g00011 223 Pfam O-methyltransferase domain 96 205 IPR001077 GO:0008171
Sebi295g00011 223 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Sebi295g00011 223 SUPERFAMILY "Winged helix" DNA-binding domain 10 89 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00011 Sebi-Chr295 197416 198701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00011 95 223 Monolignol Biosynthesis Gene Families AT1G51990 39.394 3.36e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00011 K22588 - qsu:112018723 196.438