Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi295g00006 ATGTCTGATGTGCGCAAGATTCATCCCCTCATTGATCAGTTCATACCAACGCTTGAAGGGGAGAATGGAATCTGTTATACTCACCCAGAAAAACTACCAGGAGTTAGCAAAGATGGACAAATCCGGCACTTTTTTCATAGGCCTTCTAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGATTCACACAGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGGAAAACTAGAGCAGTATATGCTGCAGGTGGAGCTGTGAAAGGTTTTAAAAAGATATTAGTACTCTACACTAACTATGGCAGGCAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAGAAAGATGGAGAATTAGTTGTCTCAAAGGTCTTCTACCAAACACAACCTAGACATTGTGGTATAACTATAAGGGATCATCCATATGAAAACATATTATTGAATCATGGAAGTGGGCATCATAATAACAGTACACTAATACCTAAAAATGCAGCTCCTTTAGATTGCTACAGTGTTGCTCCTTACATAAATTATGAGCATGTGGGTCATAATAGAGAAAGCTCCCCACAACTTATTCCAAACTTGGTTGTCCAAGGTGATGGCCCTTTTATTCGCTTAGGAATGGATGCAAACAGAGCAAGACTCGAGAGAAAGTAA 693 0.3968 MSDVRKIHPLIDQFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKIHTDEEGSETRWHKTGKTRAVYAAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRHCGITIRDHPYENILLNHGSGHHNNSTLIPKNAAPLDCYSVAPYINYEHVGHNRESSPQLIPNLVVQGDGPFIRLGMDANRARLERK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi295g00006 230 Gene3D NAC domain 3 143 IPR036093 GO:0003677|GO:0006355
Sebi295g00006 230 FunFam NAC domain-containing protein 73 1 143 - -
Sebi295g00006 230 Pfam No apical meristem (NAM) protein 8 120 IPR003441 GO:0003677|GO:0006355
Sebi295g00006 230 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 150 IPR044799 GO:0003700
Sebi295g00006 230 ProSiteProfiles NAC domain profile. 1 139 IPR003441 GO:0003677|GO:0006355
Sebi295g00006 230 SUPERFAMILY NAC domain 13 139 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi295g00006 Sebi-Chr295 122027 124485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi295g00006 2 226 NAC Transcription Factor Family AT1G28470 63.203 8.81e-94 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi295g00006 NAM 2.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi295g00006 - - cave:132168531 360.918