Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi294g00057 ATGGACGAGTTGTCCAAGAACCAGATATTTGCTCTTCATGGGATTGCTGGTGCTGGGTCAGTGGCTTTAGCCACAGGTTTCACCTATCCTCTTGACACCATCAAAGTCCTCACTCAGGTTGGTTCCAGTGCCAGTAAAGAATTGAACGCTGCCCAGGTTTTGATGAGGGTACTCTCTGTGTCGGGTAATGCAGGCCTGTTCTATGGTTTTGGCTGGTTGGCTTTTGGAAGGATTTTTGGTCTGGGAGTTCGATTTGGGGTTTACGAAATCCTGACAGCCTTTTATAAAGATGGTCGGGAGGATAATTATCTCTATGCTTCTGAGGCTCTTTTGGCTGGCATGGTAGCTGGTGCCACAGAGACATTCATAAGCTCTCCATTTGAACTCATCAAGCTTCGTATGCAGGTTACCTCTGCTTCATATGTTCCAAGCTCTAAGTTTGCTTTGGAAGAGGGGGCCCGCAAACCTTTAATTGCAAGATTACTTAATGGCTGCTATCCAGACAAGAGGTCTTTGAACCAATATGTTAGTCTCATCTCCACCCTAACAACCAAAAATACTAACATATCGGGTGCTTTACTGGAGTATCCATGGACAATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTGAGAAGGCCATTAGACATTATATCTTTGGAAGGATGGAGCACATTATGGAGAGGTTTTCGTTCTGGAATTGTTCGAGATTCTGTGTTTGGTGGCATATTTTTTTCATGTTGGCAACTTTTGCACCAAGCAATGCTTGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTAAATGAAGAAGTTGGCCCATTGTCTCCTTTAGCTGTTAGTCTTGCTGCTGGATTTTCAGGTTCAGTTGCTGCTGCTGCTTCTCATGGTTTTGATACTGCAAGAAGTAGATCACAATGTACTGTGCTTCCAAAGTATGTCTCAATGGAGAGAAGGTTTCTGAAGTGGAAACGACTAGGAAACAAGTTTGAAAGATATACTGGGATCCATCCTTCTGACAGGAATGTCTTGTTCCGCAGTATTGGGTTGAGGATGGCTCGCTCTGGTTTTGCATCATTCGTGATTGTAGGAAGTTATTTCTTTGTTGTTGATCAGCTTGCTCCTCGTTTGACTTAA 1143 0.4418 MDELSKNQIFALHGIAGAGSVALATGFTYPLDTIKVLTQVGSSASKELNAAQVLMRVLSVSGNAGLFYGFGWLAFGRIFGLGVRFGVYEILTAFYKDGREDNYLYASEALLAGMVAGATETFISSPFELIKLRMQVTSASYVPSSKFALEEGARKPLIARLLNGCYPDKRSLNQYVSLISTLTTKNTNISGALLEYPWTMTGSGKPPSVCNVRRPLDIISLEGWSTLWRGFRSGIVRDSVFGGIFFSCWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPLAVSLAAGFSGSVAAAASHGFDTARSRSQCTVLPKYVSMERRFLKWKRLGNKFERYTGIHPSDRNVLFRSIGLRMARSGFASFVIVGSYFFVVDQLAPRLT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi294g00057 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Sebi294g00057 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 17 371 - -
Sebi294g00057 380 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Sebi294g00057 380 Pfam Mitochondrial carrier protein 108 142 IPR018108 -
Sebi294g00057 380 Gene3D Mitochondrial carrier domain 11 378 IPR023395 -
Sebi294g00057 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Sebi294g00057 380 SUPERFAMILY Mitochondrial carrier 11 332 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi294g00057 Sebi-Chr294 864222 867920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi294g00057 29 258 Antiporters AT1G79900 22.222 1.20e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi294g00057 - - tpra:123917368 630.172