Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi294g00056 ATGGGAGATAACAATGTCAACCTTCCACCTGGATTTCGTTTTTATCCCACAGATGAAGAGCTTGTGGTCCATTTCCTTCATAGAAAGGCTTCCCTTTTACCTTGTCATCCAGATGTCATCCCTGATCTTGACCTCTACCCATATGATCCATGGGAGCTTCATGGTAGAGCTTTGGCAGAGGGAAACCAATGGTACTACTATAGCAGAAGGACACAAAATAGGATCACTAGCAATGGTTATTGGGTGCCAATGGGAATGGAAGAACCAATTGTTACAAGCTCAAGTAACAAGAGAGTTGGTATGAAGAAATATTATGTGTTCCATTTGGGAGAAGCCCCTGATGGTAACAAAACTAATTGGATAATGCAAGAGTATAGTCTATCAGATTCTGCTTCCTCTAGCAGATCATCCAAAAAAAAAGCACAGCCAAAAAATGATGGTGATGGAACAGAGCTCTCATGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGAAGAAGTAAGCTTGCCAAATTAG 519 0.4066 MGDNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPYDPWELHGRALAEGNQWYYYSRRTQNRITSNGYWVPMGMEEPIVTSSSNKRVGMKKYYVFHLGEAPDGNKTNWIMQEYSLSDSASSSRSSKKKAQPKNDGDGTELSCLDEVFLSLDDLEEVSLPN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi294g00056 172 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Sebi294g00056 172 FunFam NAC domain-containing protein 104 17 153 - -
Sebi294g00056 172 SUPERFAMILY NAC domain 5 135 IPR036093 GO:0003677|GO:0006355
Sebi294g00056 172 PANTHER NAC TRANSCRIPTION FACTOR 56 8 138 - -
Sebi294g00056 172 MobiDBLite consensus disorder prediction 130 152 - -
Sebi294g00056 172 Gene3D NAC domain 17 150 IPR036093 GO:0003677|GO:0006355
Sebi294g00056 172 ProSiteProfiles NAC domain profile. 8 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi294g00056 Sebi-Chr294 859182 860001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi294g00056 1 136 NAC Transcription Factor Family AT1G61110 44.966 3.64e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi294g00056 NAM 2.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi294g00056 - - gmx:100813096 319.316