Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi294g00041 ATGGATGCTTTATCCTTAACCTCAAGCTTAAGCATTTCCAAGCAATTTCAATGTCTTCCACTCTCAAGTAAACAGCAAAGAACTTCTCAGGTGCACTTCAGTGTTTCATGCAGATCCACCACAATAAGCACCAAAGGAAATTTCTACAAAATGTTGTCTCTGAGTCCTGGAAGTGCAACAAAGGATGAGATAAAGAGGGCTTATAGATCAATGGCTCTTCAGTACCATCCTGATGTGTGCCATGATCCTTCAATGAAAGAGGAGTCAACTAGGATGTTTGTTCAGCTAAATACAGCTTATGAGACACTGTCAAATCCTGTGCTTAGAGCACAGTATGATTGTGAATTGGGTTTGAGAAACAACATGGTCAGTGTTAGTGGTGATGAAAGATGGGGAGAGGGTAGGTGGCAGGAGCAAGTGATTGAGTTGAAGAAAAGGTCTCGCAGACGTATGGGACAAAAAGGGGGATCATGGGGCACCAGAATGAGGACACACATGAAAGAGAGGAATTAA 513 0.425 MDALSLTSSLSISKQFQCLPLSSKQQRTSQVHFSVSCRSTTISTKGNFYKMLSLSPGSATKDEIKRAYRSMALQYHPDVCHDPSMKEESTRMFVQLNTAYETLSNPVLRAQYDCELGLRNNMVSVSGDERWGEGRWQEQVIELKKRSRRRMGQKGGSWGTRMRTHMKERN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi294g00041 170 PRINTS DnaJ domain signature 68 83 IPR001623 -
Sebi294g00041 170 PRINTS DnaJ domain signature 88 108 IPR001623 -
Sebi294g00041 170 PRINTS DnaJ domain signature 50 68 IPR001623 -
Sebi294g00041 170 SMART dnaj_3 46 108 IPR001623 -
Sebi294g00041 170 CDD DnaJ 47 105 IPR001623 -
Sebi294g00041 170 Pfam DnaJ domain 47 113 IPR001623 -
Sebi294g00041 170 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
Sebi294g00041 170 Gene3D DnaJ domain 33 130 IPR036869 -
Sebi294g00041 170 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 24 168 - -
Sebi294g00041 170 MobiDBLite consensus disorder prediction 145 170 - -
Sebi294g00041 170 FunFam Chaperone protein dnaJ 20, chloroplastic 33 140 - -
Sebi294g00041 170 SUPERFAMILY Chaperone J-domain 40 112 IPR036869 -
Sebi294g00041 170 ProSiteProfiles dnaJ domain profile. 47 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi294g00041 Sebi-Chr294 685454 685966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi294g00041 39 113 C2H2 Transcription Factor Family AT1G74250 41.558 4.37e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi294g00041 - - gmx:100811478 223.402