Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi294g00023 | ATGGAGGAAAGGCATAGACAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTTTGTGCTGTCTGTCTTGTTGGCCATCTCTCTCATTTCTTTGCAGCAAAGGCACCATGGATCCATGCTTTTCATTCCATCGGGTTTCATCTATCCTTATCTTTGTTTACGTTACTTGGTCCTGGTCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTCTTAAAAGGGCGCCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCTTCATTTGCAGTCAGTTCATTTGCAGTCTTGCTGCCAAAATTGGGTTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTGGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAGCCAGTGATATGACAGGACTTCTTAGTATATTGCCGTCAAAAGCGCGCCTTCTCATTAACAATGGGGATAAAGAGGTTGGCTCAGTTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGAAGACCAAATTATTGTATTACCTGGAGATCGTATTCCAGCTGATGGAATTGTGAGAGCTGGTAGAAGCACTGTGGATGAGTCAAGTTTCACTGGGGAGCCACTGCCAGTAACAAAAGTACCTGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGGACTCTTACGATGGAAGTGCGGAGGCCAGGTGGTGAGACTGCTATCGGTGACATTGTTCGTCTAGTTGAAGAGGCACAGAGTAAGGAAGCTCCTATACAGCGGTTGGCTGACAAGGTGGCAGGATACTTCACTTATGGAGTGATGGCAGTCTCTGTTACCACATTTACGTTTTGGAGTCTGTTTGGCACACACATTTTACCTGCTACTGTATATCAAGGAAGTGCAGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTCGTTGCCTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCTGTGCTGGTTGGAACTTCTTTGGGGGCTAAAAGAGGATTACTTTTGCGTGGTGGAAACATTCTAGAGAAATTTGCCATGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTCACAGTTGGTAGACCTGTTGTGACAAAGATTGTGGCTCCTACATGCAGAGAAAATGCAAACTCAAGCCAAACTAAAGAAAATGCTTTGTCTGATGTTGAGGTTCTGAGGTTAGCAGCTGCTGTAGAATCAAATTCAGTACATCCAGTTGGGAAAGCAATTATGGACGCTGCTCAGGCAGTTAACAGTCACGGTGCTAAGGTGGTAGATGGAACATTCCTGGAAGAACCTGGATCTGGTGCAGTAGCAACCGTTGATAACAAACTGGTTTCTGTTGGGACATTGGACTGGATTACCAGGCATGGAGTTAGGAACGGTATACATCAACAAGTGGAGGAGTATAAAAACCAATCCTTTGTCTACGTTGGGGTTGATGATACTTTGGCTGGTGTGATTTATTTTCAAGATGAGTTAAGGGAAGATGCAAGACACGTTGTTGACACATTGTCTAAGCAAGATATTGGTGTATACATGCTGTCTGGAGACAAAAGGAATGCTGCAGAATATGTTGCATCTCTTGTTGGGATTCCCAAAGAGAAGGTGCTATCTGGAGTGAAACCAGATGAGAAAAAGAAGTTCATAAATGAACTACAAAAACATAACAACATTGTAGCTATGGTTGGTGATGGAATCAACGATGCAGCTGCTCTTGCTTCTTCACATATTGGTATTGCATTAGGTGGAGGTGTTGGAGCTGCCAGTGAGGTGTCTTCTATTGTATTGATGCGCAACCATCTCTCACAGCTACTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTATAAAACAGAATCTTTGGTGGGCTTTCATTTACAACATTGTAGGGATTCCAATTGCAGCTGGAGTGTTATTTCCGGTAAATGGTACCATGCTGACTCCATCAATTGCAGGGGCTCTCATGGGGTTCAGTTCCATTGGCGTAATGACTAACTCATTACTTTTGAGATTCAAATTTTCCTCAAAGCAGCAACAAATACATGGTGCGTTGCCAAAGACCAAACTCCATGTGGATTCTGATACAGTACATCAAAAACAGAAAATGAAGTATCCATATTAG | 2160 | 0.4333 | MEERHRQLRESGRELAVSWALCAVCLVGHLSHFFAAKAPWIHAFHSIGFHLSLSLFTLLGPGRQLILDGLKSLLKRAPNMNTLVGLGALSSFAVSSFAVLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKAASDMTGLLSILPSKARLLINNGDKEVGSVVEVPSDSLSVEDQIIVLPGDRIPADGIVRAGRSTVDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMEVRRPGGETAIGDIVRLVEEAQSKEAPIQRLADKVAGYFTYGVMAVSVTTFTFWSLFGTHILPATVYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVNTVVFDKTGTLTVGRPVVTKIVAPTCRENANSSQTKENALSDVEVLRLAAAVESNSVHPVGKAIMDAAQAVNSHGAKVVDGTFLEEPGSGAVATVDNKLVSVGTLDWITRHGVRNGIHQQVEEYKNQSFVYVGVDDTLAGVIYFQDELREDARHVVDTLSKQDIGVYMLSGDKRNAAEYVASLVGIPKEKVLSGVKPDEKKKFINELQKHNNIVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMRNHLSQLLDALELSRLTMNTIKQNLWWAFIYNIVGIPIAAGVLFPVNGTMLTPSIAGALMGFSSIGVMTNSLLLRFKFSSKQQQIHGALPKTKLHVDSDTVHQKQKMKYPY | 719 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi294g00023 | 719 | Pfam | E1-E2 ATPase | 144 | 340 | - | - | |
Sebi294g00023 | 719 | NCBIfam | HAD-IC family P-type ATPase | 119 | 381 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi294g00023 | 719 | NCBIfam | HAD-IC family P-type ATPase | 447 | 652 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi294g00023 | 719 | Gene3D | - | 130 | 253 | - | - | |
Sebi294g00023 | 719 | SFLD | p-type atpase | 343 | 623 | IPR044492 | - | |
Sebi294g00023 | 719 | PRINTS | P-type cation-transporting ATPase superfamily signature | 596 | 608 | - | - | |
Sebi294g00023 | 719 | PRINTS | P-type cation-transporting ATPase superfamily signature | 573 | 592 | - | - | |
Sebi294g00023 | 719 | PRINTS | P-type cation-transporting ATPase superfamily signature | 518 | 528 | - | - | |
Sebi294g00023 | 719 | PRINTS | P-type cation-transporting ATPase superfamily signature | 360 | 374 | - | - | |
Sebi294g00023 | 719 | PRINTS | P-type cation-transporting ATPase superfamily signature | 496 | 507 | - | - | |
Sebi294g00023 | 719 | PRINTS | P-type cation-transporting ATPase superfamily signature | 199 | 213 | - | - | |
Sebi294g00023 | 719 | Pfam | haloacid dehalogenase-like hydrolase | 356 | 585 | - | - | |
Sebi294g00023 | 719 | SUPERFAMILY | Calcium ATPase, transduction domain A | 161 | 249 | IPR008250 | - | |
Sebi294g00023 | 719 | NCBIfam | copper-translocating P-type ATPase | 62 | 683 | - | - | |
Sebi294g00023 | 719 | SUPERFAMILY | HAD-like | 358 | 680 | IPR036412 | - | |
Sebi294g00023 | 719 | Gene3D | - | 371 | 504 | IPR023299 | GO:0000166 | |
Sebi294g00023 | 719 | NCBIfam | heavy metal translocating P-type ATPase | 80 | 682 | IPR027256 | GO:0006812|GO:0016020|GO:0019829 | |
Sebi294g00023 | 719 | Gene3D | - | 351 | 623 | IPR023214 | - | |
Sebi294g00023 | 719 | PANTHER | ATP7, ISOFORM B | 8 | 684 | - | - | |
Sebi294g00023 | 719 | SFLD | Haloacid Dehalogenase | 343 | 623 | - | - | |
Sebi294g00023 | 719 | PRINTS | Copper-transporting ATPase signature | 550 | 567 | - | - | |
Sebi294g00023 | 719 | PRINTS | Copper-transporting ATPase signature | 343 | 358 | - | - | |
Sebi294g00023 | 719 | PRINTS | Copper-transporting ATPase signature | 646 | 660 | - | - | |
Sebi294g00023 | 719 | PRINTS | Copper-transporting ATPase signature | 113 | 132 | - | - | |
Sebi294g00023 | 719 | PRINTS | Copper-transporting ATPase signature | 65 | 84 | - | - | |
Sebi294g00023 | 719 | FunFam | Copper-transporting ATPase 1, putative | 131 | 253 | - | - | |
Sebi294g00023 | 719 | FunFam | Copper-transporting ATPase PAA1 chloroplastic | 489 | 640 | - | - | |
Sebi294g00023 | 719 | CDD | P-type_ATPase_Cu-like | 13 | 684 | - | - | |
Sebi294g00023 | 719 | FunFam | Copper-transporting ATPase PAA1 chloroplastic | 371 | 504 | - | - | |
Sebi294g00023 | 719 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 362 | 368 | IPR018303 | - | |
Sebi294g00023 | 719 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 111 | 655 | IPR023298 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi294g00023 | Sebi-Chr294 | 345496 | 380548 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi294g00023 | 62 | 683 | Primary Pumps ATPases | AT1G63440 | 39.062 | 1.89e-125 | 396 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi294g00023 | K17686 | - | gmx:100796210 | 1216.83 |