Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi294g00013 ATGGCACAGGATGGTTCCATTTATTGTGGTTTTTGTGCTGATAGGCAATATGTTGGTGGGATGCCAGTGGTTAGGGATATCTTCCTACTTATATCCCCTTTGGTGGTTGGAGGGCGTTCTTCATGTAACTCTGGTAAAGGCAAGAGTAGTCAGTCCCCCGTCAAGTATGGCTTTAGCCTTGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCGAAATTCGTCCAGCTCAAACGGCAAGAGCTAGGACTTTTTGCTATATATGACGGACACCTGGGAGACAGTGTACCGGCATATTTACAAAAGCATCTCTTTTCTAATATTTTGAAGGAAGAGGACTTCTGGAATGATCCATTCATGTCCATTTGTAAAGCTTATGAGACAACAGATCAGGCCATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCTGTGACTGCAATTCTCATCAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTTTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGATCATGAACCCAATACTGAACGGGGTAGCATTGAGAACAGAGGTGGCTTTGTCTCAAATATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCGGTTTCTCGAGCATTTGGAGACAAAAACCTCAAAACACACTTGCGATCTGATCCTGACATTCAGTATGCTGATATTGACCCAGATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAAGCTGTTGATATTGCAAGAAGGATAAAGGATCCACAAAGGGCAGCGAAACAGCTACTTACTGAGGCATTGAACAGAGAGAGTAAAGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGCATGA 915 0.4372 MAQDGSIYCGFCADRQYVGGMPVVRDIFLLISPLVVGGRSSCNSGKGKSSQSPVKYGFSLVKGKANHPMEDYHVAKFVQLKRQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWNDPFMSICKAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADIDPDIELLILASDGLWKVMANQEAVDIARRIKDPQRAAKQLLTEALNRESKDDISCIVVRFKA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi294g00013 304 CDD PP2Cc 54 302 IPR001932 -
Sebi294g00013 304 Gene3D - 39 304 IPR036457 -
Sebi294g00013 304 SMART PP2C_4 51 300 IPR001932 -
Sebi294g00013 304 FunFam Probable protein phosphatase 2C 39 46 303 - -
Sebi294g00013 304 SMART PP2C_SIG_2 66 302 IPR001932 -
Sebi294g00013 304 PANTHER PROTEIN PHOSPHATASE 50 302 IPR015655 GO:0004722|GO:0006470
Sebi294g00013 304 ProSiteProfiles PPM-type phosphatase domain profile. 55 302 IPR001932 -
Sebi294g00013 304 Pfam Protein phosphatase 2C 64 295 IPR001932 -
Sebi294g00013 304 SUPERFAMILY PP2C-like 50 303 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi294g00013 Sebi-Chr294 218289 221773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi294g00013 35 303 PP2C-type Phosphatase Gene Family AT1G22280 73.818 4.06e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi294g00013 K17506 - gmx:100801722 506.138