Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi294g00001 ATGGCTTCCCTTCTTCCACCTGCTCCTAGTAATCATCAAAATAAACCAAACACAACATCATTAATACTCGAGCAAAATGTCCTAGACATTGAAGCTCAAGCCACTAGATTGGAGATAGAAGCATTGAAAGCTCCAAAAGGAATCAATGGAAGAGATCATGCTTCAGAGATGGGTATATGCTTGACATGGAAGGATCTATGGGTGACTGCTTCAATGGGAAAACATGGAAGCAAATCAATTCTTGAGGGTCTAACTGGTTATGCTAAACCAGGGCAACTCTTAGCCATAATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATACTTTAGCAGGGAGATTAGGTTCAAACACAAAACAATCAGGGGAGATTCTGATCAATGGCAACAAACAAGCACTAGCTTATGGAACCTCGGCATATGTCACACAAGATGATACCTTAATGACAACCTTAACAGTTAGAGAAGCAGTGCACTACTCAGCTCAACTCCAATTGCCTGATTCAATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGACTTTACAATCAGAGAAATGGGTCTCCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATTAGTGGTGGTCAAAAGAGGAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTACACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCTGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTGGATAAAAAAGATGGCATTCAGAGAACTATCATTGCCTCAATCCATCAACCTAGTACAGAAGTTTTTCAACTTTTCCACAACCTTTGCCTTCTATCTTCAGGCAGAACTGTTTACTTTGGCCCTGCTTCTGCTGCATGTGAGTTTTTTGCATCAAATGGTTTTCCTTGTCCTGCCCTCCAGAATCCATCTGATCATTTACTTAAAACTATAAATAAGGATTTTGATCAGGATATTGAGGTGGGTTTGGAAGGGAGTGGAACAATGCCCACAGAAGAAGCAATTCGCATCCTTGACACTGATTCAACGGACAAGAAGAGAAGGCATGCTGGCTTCCTTAATCAGTGTTTAGTTCTTACCAAAAGATCTTCCGTGAACATGTTTCGTGATTTAGGCTATTACTGGTTACGCCTTGCCATATATATAGCATTAGCTATATGTTTAGCTACTGTCTTCTATGATTTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTATCTTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTAGAGGACATGAAGGTATTTGGACGTGAAAGACTAAATGGGCATTATGGTGTTATTGCATATGTCATTGGGAACACCTTTTCGTCTATCCCATACTTGTTTATGGTTTCGTTGATTCCTGGAGCTATAGCTTATTACCCTCCTGGTCTTCAGAAAGGATTTGAGCACTTTGTGTATTTTATTTGTGTTCTATTTGCTTGTCTAATGTTAGTAGAGAGCCTTATGATGATTGTGGCTAGCATTGTCCCCAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAGTCATGATGTTATGTGGTGGGTTCTTTAGATTGCCAAATGATCTTCCTAAGCCAGTTTGGAAATACCCAATGTTCTATGTTGCCTTCCATAGGTATGCTTATCAAGGAATGTTCAAAAATGAATTTGAAGGGCTAAAGTTTGAAGGAAGTGAAGTTGTTGGTGGCTCACCTAATTACATTAGTGGTGAAGAGATTCTAAGGAATAAATGGCAAGTAGACATGAGTTACTCAAAGTGGGTTGATTTTGGAATCTTGTTGGCAATGAATGTTCTATATCGGGTTCTATTTTTGGTTATCATCAAAACTACTGAGAAGCTAAAGCCACTTGTTGTATCAATCATGTCGGGGTCTCCCAAGCAAACAATACAGATCATGGAGAATCCTAATGCCACTCCTTTACAAGGATAA 2004 0.3972 MASLLPPAPSNHQNKPNTTSLILEQNVLDIEAQATRLEIEALKAPKGINGRDHASEMGICLTWKDLWVTASMGKHGSKSILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTKQSGEILINGNKQALAYGTSAYVTQDDTLMTTLTVREAVHYSAQLQLPDSMSKAEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPTLLFLDEPTSGLDSAASYYVMKRIATLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGRTVYFGPASAACEFFASNGFPCPALQNPSDHLLKTINKDFDQDIEVGLEGSGTMPTEEAIRILDTDSTDKKRRHAGFLNQCLVLTKRSSVNMFRDLGYYWLRLAIYIALAICLATVFYDLDKSNGSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFGRERLNGHYGVIAYVIGNTFSSIPYLFMVSLIPGAIAYYPPGLQKGFEHFVYFICVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGVMMLCGGFFRLPNDLPKPVWKYPMFYVAFHRYAYQGMFKNEFEGLKFEGSEVVGGSPNYISGEEILRNKWQVDMSYSKWVDFGILLAMNVLYRVLFLVIIKTTEKLKPLVVSIMSGSPKQTIQIMENPNATPLQG 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi294g00001 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 54 647 - -
Sebi294g00001 667 Pfam ABC transporter 83 232 IPR003439 GO:0005524
Sebi294g00001 667 FunFam ABC transporter G family member 11 59 349 - -
Sebi294g00001 667 ProSitePatterns ABC transporters family signature. 204 218 IPR017871 GO:0005524|GO:0016887
Sebi294g00001 667 SMART AAA_5 90 279 IPR003593 GO:0016887
Sebi294g00001 667 Pfam ABC-2 type transporter 363 574 IPR013525 GO:0016020|GO:0140359
Sebi294g00001 667 Pfam ABC-2 type transporter 264 318 IPR043926 GO:0140359
Sebi294g00001 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 307 IPR003439 GO:0005524
Sebi294g00001 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 298 IPR027417 -
Sebi294g00001 667 Gene3D - 61 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi294g00001 Sebi-Chr294 8372 13074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi294g00001 80 292 Calmodulin-binding Proteins AT2G36910 29.680 1.83e-11 65.9