Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi293g00084 ATGGCTCATCGAAGAGCCAAGCTCTTGTTCCTTCTATACGCTCTCTGCTTTTCTCTCAGTGCCATCGCAGGAAAGAGCTATTACGATATACTTCAAGTATCGAAGGGTGCATCGGATGAACAGATAAAGAGAGCGTACAGGAAGCTCGCGTTGAAGTACCATCCCGATAAGAATCCGGGAAACCAAGAAGCTAATAAGAGATTTGCCGAGATTAACAACGCGTATGAAGTACTGTCAGATAGCGAGAAGAGAAGCATTTATGACAGGTATGGAGAAGAGGGTTTGAAACAGCATGCTGCCGGCGGAGGCAGAGGCGGTGGAATGGGAATGAACTTCCAAGATTTTTTCGGCTCATTTTTCGGTGAGGGTCCAATGGAGGAGGAAGAGAGAATTGTGAAAGGTGATGACGTGGTTGTTGAATTGGATGCAACCCTGGAAGATTTGTACATGGGAGGTTCCTTGAAGGTTTGGAGGGAGAAAAATGTTTTAAAGCCTGCACCTGGGAAGAGACGCTGTAACTGTAGACATGAGGTTTATCACAAGCAAATAGCTCCTGGGATGTTTCAACAAATGACAGAACAGGTCTGTGAGCAATGTCCAAATGTTAAATATGAAAGAGATGGATATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGACGGGCAGGAAGTGCTATTTTATGAGGATGGTGAGCCTATAATTGATGGAGAATCTGGAGATCTAAGGTTTCGTATCCGAACAGCACCCCATGACCTCTTCAGAAGGGAGGGCAATGACTTGCACACCACTGTCACCATAACTCTGGTTCAAGCCCTTGTTGGCTTTGAGAAGACTATTAAACACCTAGACGAGCACCTAGTGGACATAGGCACGAAGGGAATCACAAATCCAAAGCAAGTGAGGAAGTTCAAAGGAGAGGGGATGCCACTGCACATGAGCACAAAGAAAGGAGATCTTTACGTCACATTTGAGGTTCTATTCCCCACCTCACTAACGGAGGAGCAGAAAACAAATATAAAAGCAGTTCTTGATTAG 1038 0.4489 MAHRRAKLLFLLYALCFSLSAIAGKSYYDILQVSKGASDEQIKRAYRKLALKYHPDKNPGNQEANKRFAEINNAYEVLSDSEKRSIYDRYGEEGLKQHAAGGGRGGGMGMNFQDFFGSFFGEGPMEEEERIVKGDDVVVELDATLEDLYMGGSLKVWREKNVLKPAPGKRRCNCRHEVYHKQIAPGMFQQMTEQVCEQCPNVKYERDGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHDLFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDIGTKGITNPKQVRKFKGEGMPLHMSTKKGDLYVTFEVLFPTSLTEEQKTNIKAVLD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi293g00084 345 Gene3D DnaJ domain 23 128 IPR036869 -
Sebi293g00084 345 Pfam DnaJ domain 27 88 IPR001623 -
Sebi293g00084 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 338 IPR008971 GO:0006457|GO:0051082
Sebi293g00084 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 132 256 IPR008971 GO:0006457|GO:0051082
Sebi293g00084 345 FunFam DnaJ protein ERDJ3B 23 129 - -
Sebi293g00084 345 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Sebi293g00084 345 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Sebi293g00084 345 PRINTS DnaJ domain signature 46 61 IPR001623 -
Sebi293g00084 345 PRINTS DnaJ domain signature 63 83 IPR001623 -
Sebi293g00084 345 PRINTS DnaJ domain signature 28 46 IPR001623 -
Sebi293g00084 345 PRINTS DnaJ domain signature 83 102 IPR001623 -
Sebi293g00084 345 Gene3D - 251 329 - -
Sebi293g00084 345 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 5 344 - -
Sebi293g00084 345 CDD DnaJ_C 135 332 - -
Sebi293g00084 345 FunFam DnaJ subfamily B member 11 250 345 - -
Sebi293g00084 345 CDD DnaJ 27 80 IPR001623 -
Sebi293g00084 345 Pfam DnaJ C terminal domain 138 329 IPR002939 -
Sebi293g00084 345 Gene3D - 129 250 - -
Sebi293g00084 345 SMART dnaj_3 25 83 IPR001623 -
Sebi293g00084 345 SUPERFAMILY Chaperone J-domain 24 122 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi293g00084 Sebi-Chr293 1069347 1073606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi293g00084 18 90 C2H2 Transcription Factor Family AT1G74250 39.744 1.11e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi293g00084 K09517 - gmx:100807885 622.854