Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi293g00066 ATGTCCGCCGATTCACATGCCCCTAAGGGTCTCCTCTGCAATGCCGGCGCTGGTGCTGCCGCTGGGGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCTTGGGGCGCCTCAGCTTGCTAATGGAACTGTTAAAGGCAGTGTTATAGTTGGTAGCTTGGAGCAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGGCTAGCCCCAACTGTGTTGGCCTTACTTCCAAACTGGGCGGTCTATTTTACCATGTATGAGCAGCTCAAGAGCCTGCTTTGTTCTAATGATGAAAGCCATCACCTTTCAATCGGAGCTAATATGGCAGCTGCTTCGGCTGCTGGAGCTGCAACTACTATTGTTACAAATCCGCTTTGGGTTGTCAAGACTAGACTCCAAACCCAGGGAATGAGACCTGGTATTATGCCATATAGGAGCACTCTATCTGCTTTGAAGAGAATTGCTCATGAGGAGGGCATTCGGGGGCTGTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAACATATGAGAAAATAAAATTTTATTTGGCAAATAAAGATAGCTCAGCAATGGATAAGCTAGGTGTACGTGATGTTGCAATTGCCTCATCAGTCGCCAAAATTTTTGCTTCTACATTGACATATCCTCATGAGGTTGTTCGTTCTAGACTGCAAGAACAAGGGCACCATTCGGAGAAGCGATACACTGGTGTGACTGACTGCATTAGAAAGGTTTTTCAACAAGAGGGGCTTCCTGGTTTCTACCGCGGGTGCGCCACCAACCTCCTAAGGACAACCCCAGCTGCAGCAATTACATTCACCAGCTTCGAAATGATACACTGGTCACCTATGTTACCACTCAACTCCATTGTTGCTGAAGTGCTAAGTGGTGGGATGTTATGTGTGCCTTTGGGGAGGTACTGA 975 0.4749 MSADSHAPKGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVLGAPQLANGTVKGSVIVGSLEQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKSLLCSNDESHHLSIGANMAAASAAGAATTIVTNPLWVVKTRLQTQGMRPGIMPYRSTLSALKRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLANKDSSAMDKLGVRDVAIASSVAKIFASTLTYPHEVVRSRLQEQGHHSEKRYTGVTDCIRKVFQQEGLPGFYRGCATNLLRTTPAAAITFTSFEMIHWSPMLPLNSIVAEVLSGGMLCVPLGRY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi293g00066 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 199 IPR018108 -
Sebi293g00066 324 SUPERFAMILY Mitochondrial carrier 10 295 IPR023395 -
Sebi293g00066 324 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 297 IPR044712 GO:0006862|GO:0055085
Sebi293g00066 324 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Sebi293g00066 324 PRINTS Mitochondrial carrier protein signature 76 96 IPR002067 GO:0055085
Sebi293g00066 324 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Sebi293g00066 324 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Sebi293g00066 324 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085
Sebi293g00066 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 299 IPR018108 -
Sebi293g00066 324 Gene3D Mitochondrial carrier domain 2 108 IPR023395 -
Sebi293g00066 324 Gene3D Mitochondrial carrier domain 109 299 IPR023395 -
Sebi293g00066 324 FunFam NAD+ transporter 108 299 - -
Sebi293g00066 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 101 IPR018108 -
Sebi293g00066 324 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Sebi293g00066 324 Pfam Mitochondrial carrier protein 111 203 IPR018108 -
Sebi293g00066 324 Pfam Mitochondrial carrier protein 216 296 IPR018108 -
Sebi293g00066 324 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi293g00066 Sebi-Chr293 797657 803223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi293g00066 1 297 Chloroplast and Mitochondria Gene Families AT2G47490 78.595 1.17e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi293g00066 K15115 - qsa:O6P43_007212 510.76