Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi293g00045 ATGGGAGGTAAACTGCTTCAAACAGCCACTGACGGTGAAAGCGTTGTGACAAAAGCAGAAGTACTTGAGGCTTGTTGGAGAAGGAATCAATCGACAATTATCACTGGCAATCACAATGTGGTTGATGGTTTCACAACATTCAACTCAGCAACATTTGCATGTAACTTGATGATGAGCACCACTAACATTAAAGGGGAATATTGGCTGGCAGCTGTGGTCGGTCAAGGGTTTGTAGCAGTGAACATAACATTCCGCAACACTGCTGGACCAAGCAAGCACCAAGCAGTTGCACTCAGAAGTGGAGCAGATATGTCCACCTTCTACAGCTGCAGCTTTGAAGGATATCAAGACACATTGTATACACATTCCATGAGGCAGTTTTATAGAGAATGTGATATCTATGGCACTGTGGACTTCATATTTGGAAATGCTGCTGTTGTTTTGCAAAACTGCAACATCTATCCCCCGCCTTCCCCTCAGTGGACAATTCAATACCATCACAGCTCAAGGTCGAACGGATCCAAGTCAAAACACAGGCACTTCCAATACAGAATGCTACTATTAAAGCAGCTGATGATTTGGCTCCAAAAGTTGGTACAGTGCAAACGTACCTTGGGAGACCATGGAAACAATATTCAAGGACAGTTGTGA 651 0.4393 MGGKLLQTATDGESVVTKAEVLEACWRRNQSTIITGNHNVVDGFTTFNSATFACNLMMSTTNIKGEYWLAAVVGQGFVAVNITFRNTAGPSKHQAVALRSGADMSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPPPSPQWTIQYHHSSRSNGSKSKHRHFQYRMLLLKQLMIWLQKLVQCKRTLGDHGNNIQGQL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi293g00045 216 PANTHER PECTINESTERASE 30 156 - -
Sebi293g00045 216 SUPERFAMILY Pectin lyase-like 30 165 IPR011050 -
Sebi293g00045 216 ProSitePatterns Pectinesterase signature 2. 133 142 IPR033131 -
Sebi293g00045 216 Pfam Pectinesterase 30 155 IPR000070 GO:0030599|GO:0042545
Sebi293g00045 216 Gene3D - 13 180 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi293g00045 Sebi-Chr293 577425 578302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi293g00045 32 159 Carbohydrate Esterase AT1G02810 70.543 2.11e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi293g00045 K01051 - gmx:100786124 198.364