Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi293g00043 ATGGAAGCGGAAAACTTCACCACCATCAACGACGCCATCGCTGCGGCGCCAAACAAGACTTCCTCAACGGCCGGGTACTTCTTGATCTATGTCACTGCAGGTGTTTACGAGGAAAATGTGTCTATTGATAAGAAAAAGACGTACTTGATGATGGTTGGAGATGGCATCAACAAGACAATCATTACCGGCAATCGCAGTGTCGTTGATGGCTGGACAACCTTCAAGTCAGCAACCTTTGCGGTGGTTGGACGAGGATTTGTGGGTGTGAATATGACTATCCGTAACACAGCGGGGCCAGAGAAGCACCAAGCGGTTGCACTTCGAAATGGAGCAGATCTCTCCACGTTTTACAGTTGCAGCTTCGAGGGGTACCAAGACACACTCTATGCCCATTCCCTACGACAATTCTACAGGGAATGTGACATCTACGGCACAGTAGATTTCATATTCGGAAACGCTGCAGCTGTATTCCAGAACTGCAACATGTATCCTCGCCTCCCAATGAGTGGACAATTCAACGCTATAACCGCACAAGGCCGAACCGATCCCAACCAAAACACGGGCACTTCCATCCATAACTGTACCATTAGAGCAGCCGATGACTTGGCTGCAAGCAACGGTGCAGCTGCAACGTATCTGGGAAGGCCTTGGAAGGAGTACTCGAGGACGGTTTATATGCAGAGTTTCATGGACAGTGTGATTGATGGTGCTGGGTGGCGTGAATGGAATGGTGATTTTGCTTTGAGCACTTTGTATTATGCTGAGTTTAACAACACTGGAACTGGATCTAGCACTGCTAACAGAGTGACATGGCCTGGTTACCACGTGATTAACGCCACCGATGCTGCAATTTTACTGTCTCTAGTTTCTTGCTTGGAGATGACTGGCTGCCCCAGACCGGAGTCACTTATACCAGTAACTTGA 924 0.487 MEAENFTTINDAIAAAPNKTSSTAGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFKSATFAVVGRGFVGVNMTIRNTAGPEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNMYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRAADDLAASNGAAATYLGRPWKEYSRTVYMQSFMDSVIDGAGWREWNGDFALSTLYYAEFNNTGTGSSTANRVTWPGYHVINATDAAILLSLVSCLEMTGCPRPESLIPVT 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi293g00043 307 Gene3D - 2 296 IPR012334 -
Sebi293g00043 307 ProSitePatterns Pectinesterase signature 2. 142 151 IPR033131 -
Sebi293g00043 307 PANTHER PECTINESTERASE 4 282 - -
Sebi293g00043 307 Pfam Pectinesterase 4 283 IPR000070 GO:0030599|GO:0042545
Sebi293g00043 307 SUPERFAMILY Pectin lyase-like 4 283 IPR011050 -
Sebi293g00043 307 FunFam Pectinesterase 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi293g00043 Sebi-Chr293 560362 561667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi293g00043 5 282 Carbohydrate Esterase AT4G02330 78.417 3.11e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi293g00043 K01051 - gmx:100780568 531.176