Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi293g00007 | ATGGCGCTCAAGCTTTATGGTCTGGCCATGTCCACAAACACCACCAGAGCCATGATCTGTCTCCATGAGAAAGAGGTGGATTTTGAGCTTGTTTCAGTCAATGTGTTCACTGCAGAACATAAGCAGCCTCCTTTTCTCTCCAAGAATCCCTTTGGTTTGGTTCCAGTACTAGAAGATGGTGATCTCACCCTCTTTGAGTCCAGAGCCATCACTGCATATGTAGCTGAGAAGTTCAAGGAAACAGGACCTGATCTGATTAGGCACAATGATGCAAAAGAAGCTGCATTGGTGAAGATGTGGACAGAGGTAGAGTCACACTACTATGAGCCAGCAGTGTCACCCATTATCTATGAATACTTTGTGGCACCTTTTCAAGGCCAAGAACCCAACAAGTCAGTGATTGACACTAATGTGGAGAAGCTGAAGAATGTGTTAGATGTGTATGAGGAGAAGCTGAGCAGCACCAAGTACCTTGCTGGGGACTTTTATAGCCTTGCGGATCTTTGCCATATCTCTGAAACTCACTATTTTATGCAGACTCCATGTGCTTCAATGATCAATGATCGTCCCCATGTTAAGGCTTGGTGGGAGGATATATCTTCCAGGCCTGCTTTTAAGAAAGTTGAGGGAGGTATGACTTTTGGTCAGAATCAGAAATGA | 660 | 0.447 | MALKLYGLAMSTNTTRAMICLHEKEVDFELVSVNVFTAEHKQPPFLSKNPFGLVPVLEDGDLTLFESRAITAYVAEKFKETGPDLIRHNDAKEAALVKMWTEVESHYYEPAVSPIIYEYFVAPFQGQEPNKSVIDTNVEKLKNVLDVYEEKLSSTKYLAGDFYSLADLCHISETHYFMQTPCASMINDRPHVKAWWEDISSRPAFKKVEGGMTFGQNQK | 219 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi293g00007 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 76 | IPR004045 | - | |
| Sebi293g00007 | 219 | SUPERFAMILY | GST C-terminal domain-like | 73 | 210 | IPR036282 | - | |
| Sebi293g00007 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 3 | 208 | - | - | |
| Sebi293g00007 | 219 | SUPERFAMILY | Thioredoxin-like | 2 | 81 | IPR036249 | - | |
| Sebi293g00007 | 219 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 203 | IPR004046 | - | |
| Sebi293g00007 | 219 | FunFam | Glutathione S-transferase F2 | 2 | 86 | - | - | |
| Sebi293g00007 | 219 | CDD | GST_N_Phi | 2 | 77 | - | - | |
| Sebi293g00007 | 219 | FunFam | Glutathione S-transferase F2 | 88 | 209 | - | - | |
| Sebi293g00007 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
| Sebi293g00007 | 219 | Gene3D | - | 87 | 209 | - | - | |
| Sebi293g00007 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 219 | IPR010987 | - | |
| Sebi293g00007 | 219 | Gene3D | Glutaredoxin | 1 | 86 | - | - | |
| Sebi293g00007 | 219 | CDD | GST_C_Phi | 92 | 208 | IPR034347 | - | |
| Sebi293g00007 | 219 | SFLD | Glutathione Transferase (cytosolic) | 1 | 212 | IPR040079 | - | |
| Sebi293g00007 | 219 | SFLD | Main.5: Phi-like | 1 | 212 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi293g00007 | Sebi-Chr293 | 88233 | 89246 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi293g00007 | 1 | 215 | Glutathione S-transferase Gene Family | AT3G62760 | 59.535 | 3.06e-98 | 283 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi293g00007 | K00799 | - | gmx:100815147 | 405.986 |