Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi292g00030 ATGAGGTTAGATAGGAAAAGAGATCATAGACCTATCACTCACACTAAGTGTAATGCTAAGCTCCTGATCCACTACCATCAAAGGTCAGGTAAATGGAGAGTGGTCTCCTTTGAGGAGTGTCACAATCATGAACTTATTTCAGCAAAATTTGTGCATTTGATCCCTGCATACCGTAAAATGACTGATGCAGACAAAGCGCAGGTGGATAGTTTGCATTCGTTTGGGGTAAGAACATGTCACATAATGGGGTACCTCGTATCTCAAAAGGGTGGATATGGTGGTGTTGGTTTTACTAGAAAGGATTTATATAACTATTTGGACTGCAAAACTCATATGAAGATTAAAGATGGGGACACACGTGCTGCATTGAGTTATTTACAAGGCAAATCTGACAATGGAGGAACATTAGTTACTAGATACCAAAATACTAGAGATGAACCTGTGATGAGTACACCACTTGCCAAGATTGAGAAAGAGGCTTCCAAAGTCTATACACTAGAGATTTTTAGAGAAGTGAAACAGCAGATTGAAAAGTCTTGTGCATTAAATGTTATTGGAAGAGAAGAAGTTGGAGAAAAATTGTTTGAATCTCGCGGAATTCCTTGTTCCCATATCATTTCTGTCATGAAAAATGAACATATGGAACATATTCCAAGTAACTTGATATTGTCAAGGTGGACAAAGAATGCCAAGAGAGATGTCCTTTATTCTTCACAGTCAGATGAAACATATGATGAATTAGGCAATACCATTCGTTACTCTGCCTTCATTTCTGCGTGTAATGCTTTGTTTGAATCTGGGGGGAAAAGGAGGGGGTGTTTCTCTGAATTAGTTGATGATATTCACAAGCTGACTTTGAAGTATAAAACCTATGGAGCTCAACATTCCTCTCAAAGTGATCCAGCTAAAAACATTGGGGAGCCTACTACGGTGAAAACTAAAGGTGCTCCTAAGAAAAAAAAGTTTACGAAGAAGAGGCATTGTTCAAATTGTACAAGTACTGGCCACACAATCAGGAGATGTCCAATGCGCTCTGGTACTGTCGATGCTCCTACATTTGATGGTTCAGATGATAATGAATTGAGCATACCGGCTGATTGTGAGCGTGAAGTTAGGGACTGTGATGAGTCTATGGCTCAAACTAATGTTTCTAATGATATTCTAAGCCAAAATGTTAAGAAAGATAAAGGGAAAGGGCTCCAAAAAACAATTGTTGGCAGAAAAAGGAAGCAAAAAAATGTAAAAGACAACACAATTGTTTCAGATAAAGACCATGTTTCTGCAAAGGATAAGTGTAGTAGTGGATCCAAACCTATCAATGTAGAGGTACAAAATTTAAATGGTGGTGTGCAGTCTGTAAATCCTGGGATGCAGTCCATGTATTTCAATTCAATTCCAAATGTGTCATCTTGGAATGGTTTGCTTCAACAAGTTATGAACAATGGAGGCCAAGACAGTATCATTCATCCGCGAGTGAGGGATACTATGTAA 1491 0.3856 MRLDRKRDHRPITHTKCNAKLLIHYHQRSGKWRVVSFEECHNHELISAKFVHLIPAYRKMTDADKAQVDSLHSFGVRTCHIMGYLVSQKGGYGGVGFTRKDLYNYLDCKTHMKIKDGDTRAALSYLQGKSDNGGTLVTRYQNTRDEPVMSTPLAKIEKEASKVYTLEIFREVKQQIEKSCALNVIGREEVGEKLFESRGIPCSHIISVMKNEHMEHIPSNLILSRWTKNAKRDVLYSSQSDETYDELGNTIRYSAFISACNALFESGGKRRGCFSELVDDIHKLTLKYKTYGAQHSSQSDPAKNIGEPTTVKTKGAPKKKKFTKKRHCSNCTSTGHTIRRCPMRSGTVDAPTFDGSDDNELSIPADCEREVRDCDESMAQTNVSNDILSQNVKKDKGKGLQKTIVGRKRKQKNVKDNTIVSDKDHVSAKDKCSSGSKPINVEVQNLNGGVQSVNPGMQSMYFNSIPNVSSWNGLLQQVMNNGGQDSIIHPRVRDTM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi292g00030 496 MobiDBLite consensus disorder prediction 293 321 - -
Sebi292g00030 496 PANTHER OS01G0519700 PROTEIN 4 135 - -
Sebi292g00030 496 Pfam FAR1 DNA-binding domain 5 46 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi292g00030 Sebi-Chr292 1109916 1112624 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi292g00030 FAR1 6.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi292g00030 - - ccaj:109792835 189.889