Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi292g00014 ATGATCCTTCCAATTACCAAAGTTTCTTTCTTCTTACTCTTTTGCCTTATTGGGATTGTCTCAGCTCAGTTGTCCTCCACTTTTTATGCCAAAACTTGTCCTACTGCGCTTTCAACCATTAGAACAGAAGTGATCTCTGCTGTCAGCAAAGAGGCTCGCATGGGAGCATCTCTGCTCCGTCTGCATTTCCATGACTGTTTTGGGTGTGATGCATCAGTACTATTAGACGATACATCGAGTTTCACAGGTGAGAAAACAGCAGGCCCCAATGCTAATTCACTGAGAGGCTTTGATGTAATAGACACCATAAAGTCTAAACTTGAGAGCTCATGCCCTGGTGTTGTCTCTTGTGCTGACATCCTTACTGTAGCTGCAAGAGACTCTGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCCATTGGGTAGAAGAGACTCAACCACAGCAAGTTTAAGTTCTGCTAACTCTGACTTGCCTGGTCCTGGTTCTGATCTAAGTAACCTTATCTCTGCTTTCTCCAACAAAGGCTTCTCAACCAAAGAAATGGTTGCTCTATCAGGATCACACACAATTGGCCAAGCAAGGTGTACATTCTTCAGATCAAGGATTTACAACGAGAACAACATAGATTCTGCTTTTGCTAAATCATTGCAAGCAAATTGTCCCACCTCAGGTGGTGATAACAATTTGTCCCCTCTTGACACCACCACTCCAAACACCTTTGACAATGCTTACTACAGGAATTTGCAGAACAAAAAGGGTCTCTTTCACTCAGATCAAGTGCTTTTCAATGGAGGATCCACAGACTCTATAGTAAATGGTTATAGCAGCAATCCTTTAAGTTTCAGAGCTGACTTTGCCAATGCAATGGTTAAAATGGGGAACCTTAGCCCTCTTACTGGGTCTAGTGGCCAGATTAGGACCAATTGTAGGAAGACCAACTGA 945 0.4339 MILPITKVSFFLLFCLIGIVSAQLSSTFYAKTCPTALSTIRTEVISAVSKEARMGASLLRLHFHDCFGCDASVLLDDTSSFTGEKTAGPNANSLRGFDVIDTIKSKLESSCPGVVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASLSSANSDLPGPGSDLSNLISAFSNKGFSTKEMVALSGSHTIGQARCTFFRSRIYNENNIDSAFAKSLQANCPTSGGDNNLSPLDTTTPNTFDNAYYRNLQNKKGLFHSDQVLFNGGSTDSIVNGYSSNPLSFRADFANAMVKMGNLSPLTGSSGQIRTNCRKTN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi292g00014 314 Gene3D - 27 311 - -
Sebi292g00014 314 FunFam Peroxidase 27 166 - -
Sebi292g00014 314 Gene3D Peroxidase, domain 2 159 293 - -
Sebi292g00014 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Sebi292g00014 314 FunFam Peroxidase 159 293 - -
Sebi292g00014 314 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Sebi292g00014 314 SUPERFAMILY Heme-dependent peroxidases 23 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PANTHER PEROXIDASE 72-RELATED 16 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 Pfam Peroxidase 41 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 CDD secretory_peroxidase 23 313 IPR033905 GO:0004601|GO:0042744
Sebi292g00014 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00014 314 ProSiteProfiles Plant heme peroxidase family profile. 23 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi292g00014 Sebi-Chr292 347578 350020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi292g00014 19 314 Peroxidase AT5G05340 66.000 2.37e-146 413