Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi292g00012 ATGAATATCATTTCAATCTTCAAAACACGTTCCTTATTGTTATTCTTATGCTTTATTGGCATAGTCTCAGCTCAATTGTCCTCTGATTTTTACTCCTCAACGTGTCCTAATGTGCTTTCAACCATTAAGACAGCAGTAGACTCTGCTGGGTGTGATGCATCAGTTCTACTAGACGACACATCAAGTTTCACAGGTGAACAATCAGCATTTCCCAATGTTAATTCCTTAAGGGGTTTTGATGTAATAGACACCATAAAGTCTCAAGTGGAAAACTTGTGTCCTGGTGTTGTCTCTTGTGCTGACATCCTTGCTGTAGCTGCAAGAGACTCTGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCCATTGGGGAGAAGAGACTCAACCACAGCAAGTTTGAGTTCTGCTAACTCTGACTTGCCTGGTCCTGCTTCTGATCTAAGTGACCTTATCTCTAATTTCTCCAACAAAGGTTTCACAACCAATGAAATGGTTGCTCTATCAGGATCTCACACAATTGGGCAAGCTAGCTGTAGAAACTTCAGAACAAGGATTTACAATGAGACCAACATAGATTCCACCTTTGCAACATCATTGCAAGCAAAATGTCCTAGCACTGGTGGTGATGGCAATTTGTCTCCAATTGACACCACCAGTCCAAACACCTTTGACAATGCTTACTTCAAGAATTTGCAGAGCCAAAAGGGTCTATTCCACTCAGATCAAGTGCTATTTAATGGAGGATCTACAGACTCTCAAGTAAATGCTTATAGCAGTGACTCTGCAAGTTTTGCAACTGATTTTGCCAATGCAATGGTTAAAATGGGGAACCTCAGCCCACTCACTGGCTCTAGTGGCCAGATTAGGACCAATTGCAGGAGGATCAACTGA 891 0.422 MNIISIFKTRSLLLFLCFIGIVSAQLSSDFYSSTCPNVLSTIKTAVDSAGCDASVLLDDTSSFTGEQSAFPNVNSLRGFDVIDTIKSQVENLCPGVVSCADILAVAARDSVVALGGPSWTVPLGRRDSTTASLSSANSDLPGPASDLSDLISNFSNKGFTTNEMVALSGSHTIGQASCRNFRTRIYNETNIDSTFATSLQAKCPSTGGDGNLSPIDTTSPNTFDNAYFKNLQSQKGLFHSDQVLFNGGSTDSQVNAYSSDSASFATDFANAMVKMGNLSPLTGSSGQIRTNCRRIN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi292g00012 296 CDD secretory_peroxidase 25 295 IPR033905 GO:0004601|GO:0042744
Sebi292g00012 296 SUPERFAMILY Heme-dependent peroxidases 25 296 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PANTHER PEROXIDASE 72-RELATED 19 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 FunFam Peroxidase 141 275 - -
Sebi292g00012 296 Gene3D Peroxidase, domain 2 141 275 - -
Sebi292g00012 296 ProSiteProfiles Plant heme peroxidase family profile. 50 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 Pfam Peroxidase 49 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 ProSitePatterns Peroxidases proximal heme-ligand signature. 163 173 IPR019793 -
Sebi292g00012 296 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Haem peroxidase superfamily signature 115 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Haem peroxidase superfamily signature 97 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Haem peroxidase superfamily signature 163 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 Gene3D - 50 293 - -
Sebi292g00012 296 PRINTS Plant peroxidase signature 37 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 96 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 162 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 214 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 230 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 77 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 270 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00012 296 PRINTS Plant peroxidase signature 115 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi292g00012 Sebi-Chr292 324757 326725 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi292g00012 21 296 Peroxidase AT5G05340 62.000 2.54e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi292g00012 K00430 - gmx:100815142 457.603