Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi292g00010 ATGGGGTGTGATGCATCAGTGTTGTTAAACGACACAGATACATTCATAGGTGAGAAGACAGCATTTCCAAACGTGAATTCATTGAGGGGTTTCGAAGTAATAGACAACATTAAATCCGTTATAGAAGCCTTATGCCCTGGTGTTGTTTCTTGCGCTGACATCTTAGCTGTTGCTGCACGAGACTCTGTTGTTGCTCTGGGTGGACCTAGTTGGACAGTGGGTTTAGGAAGAAGAGACTCAACGACTGCAAGTTTGGCCGGTGCTAATTCTGACTTGCCAGCTCCTTTCCTCAATCTCGATGGCCTAATCACTGCTTTTGCCAACAAAGGTTTCACGGCTAGTGAGATGGTTGCTTTGTCAGGTGCTCACACAATAGGCAAAGCAAGGTGTTTAACCTTCCGACAAAGGATTTACAACGACACCAACATAGATGCCTCATATGCGGCATCACTACAAGCAATTTGTCCCTTCACAGGTGGTGATGACAATTTAGCCCCTTTAGACACTACCACTCAGAACCTTTTCGACAATAAATACTACAGCAATTTGTTGAGTTCAAAAGGCCTCTTGCACTCAGACCAAGAGCTCTTCAATGGAGGTTCCGCAGATGCCCAAGTGCAAGATTATGTTTCCCACCCATTAAACTTCAGAGCAGATTTTGCTAATGCAATGGTTAAGATGGGCAACCTTAGCCCACTAACCGGCCAGAGTGGTCAGATAAGAACCAAATGCTACCAGGTCAATCAAGTCAACAATAATAAATAA 765 0.4431 MGCDASVLLNDTDTFIGEKTAFPNVNSLRGFEVIDNIKSVIEALCPGVVSCADILAVAARDSVVALGGPSWTVGLGRRDSTTASLAGANSDLPAPFLNLDGLITAFANKGFTASEMVALSGAHTIGKARCLTFRQRIYNDTNIDASYAASLQAICPFTGGDDNLAPLDTTTQNLFDNKYYSNLLSSKGLLHSDQELFNGGSADAQVQDYVSHPLNFRADFANAMVKMGNLSPLTGQSGQIRTKCYQVNQVNNNK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi292g00010 254 Gene3D Peroxidase, domain 2 93 227 - -
Sebi292g00010 254 SUPERFAMILY Heme-dependent peroxidases 2 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 ProSitePatterns Peroxidases proximal heme-ligand signature. 115 125 IPR019793 -
Sebi292g00010 254 Gene3D - 2 244 - -
Sebi292g00010 254 PANTHER PEROXIDASE 72-RELATED 2 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Haem peroxidase superfamily signature 115 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Haem peroxidase superfamily signature 168 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Haem peroxidase superfamily signature 49 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Haem peroxidase superfamily signature 67 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 FunFam Peroxidase 93 227 - -
Sebi292g00010 254 Pfam Peroxidase 2 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 CDD secretory_peroxidase 2 244 IPR033905 GO:0004601|GO:0042744
Sebi292g00010 254 ProSiteProfiles Plant heme peroxidase family profile. 1 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 182 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 222 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 67 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 48 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 29 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi292g00010 254 PRINTS Plant peroxidase signature 114 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi292g00010 Sebi-Chr292 178816 180552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi292g00010 2 248 Peroxidase AT5G05340 60.643 1.22e-109 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi292g00010 K00430 - gmx:100815142 369.007