Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00062 ATGAAGCAAGCGCAGGGAAAGAGAAGCGCCAAGATGTGGATGGTTTTGATGTGTTTGATGTTGAGCTATTTTGGTCGCATTGAATCTCTATCTGTGACCGTGAACGAAGTCGAATGCATCTACGAATATGTGTTGTACGAGGGTGATACCGTTTCAGGGAACTTTGTTGTCGTCGACCATGACATTTTCTGGAGCTCCGATCACCCAGGCATTGATTTCACGGTGACATCTCCTGGAGGCAATACTGTCCACACTATCAAGGGAACCTCTGGCGACAAGTTTCAATTTAAAGCCCCTATACATGGAATGTATAAATTTTGTTTTCATAACCCATACTCAACACCCGAGACTGTTTCTTTCTACATCCATGTTGGTCATATTCCATCTGAGCATGACCTTGCCAAAGATGAGCATTTGGACCCAATTAATGTTAAAATTGCTGAGCTCAGAGAGGCACTAGAGTCTGTTACAGCTGAACAAAAGTACTTGAAAGCTCGTGATGCAAGACATCGCCATACGAACGAGAGCACACGGAAGCGTGTAATATTCTACACTGTGGGAGAGTACCTTCTATTGGCGGCTGTTAGTGTACTGCAAGTCATATACATAAGGCGCCTTTTCAGCAAGGGAGGAGGAGGGTGGCGTGTGGTGGTTGGAGAAGAAGCAGTGAAGCACAGGGCTTGCAATGAGAAAAAAATCGTAGAGTTGACTCAAAGTGAATATATTGTGGATAGTAGTGAAAGCACTAGGAGTAATGATCCTGATGTTGGAGGCAGTCAATATAATGATGTGGTTAATGGTGGAATGACTTCATCTGATGATTCTGAAACTAGAAAAGCTTCTTCAAGAAACAGAACATGTGATCATTCTGGAAGGTTTTCTTGTTCGAGGACAATCAGTTCACTGGCACCTATTGCTCGTGTCGAAATGTCCTCCTATTCTACATTTCAAGAGGTCGCCACTGATTTCTTGTCTGGGTTATCAGAAGATCATGTGTTAGATTCACTTGATCTCTTCATTGAAGGGAAAGCATCTGGACGGGACAGTATAAATTTCCTTAGTTTACTTGGGTTGCCATCATTTGAGGAAGATACTTTTCCAGGCTCTTTGAGGCATCCAAACATAGCTCCTGTGCTTGCAGTTTTAAAAACATCTGATCACATTAACATAGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAGCTACTCTCAGCCTTAGTGTACTTACATGGTTTAGGGGTTTGCCATGGTAATATATGCCCATCCAATATCATGTTGACTGATTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTGTATTGGAATCTAATTTAACTTTGCAAAAGAGTGAAAACATTAATTCTAAACCTGTAAAACTTGGTTGCTGTAATGGTAGCTGTCATTCTAATGGCCTTTATGCTGACCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGTTTTCATCAGTGGTGGAGAGGAGAGCTAAGCAATTTTGAGTATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGTGACCATACATTTCATCCGGTAATGCCTTGGGTAATTGATTTTAGCTCAAAGCCTGATGACAATTGTGATGCAGGGTGGCGAGACTTAACCAAAAGCAAATGGCGTTTGGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCACGTATCAGATGAATGTCTGTCAGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGGCTGCCTTTAAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAAAGGCTCTATCAATGGACCCCTGATGAATGCATTCCAGAGTTTTACTGTGATGCCCAAATTTTTAGGTCAATACATGATGGTATGGCTGATTTGGCTGTGCCTTCTTGGGCAGAGAGTCCCAAGGATTTCATTAAATTGCATCGTGACGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGGTACAAAATGTCTGGCCAGGCAGCTATTACTGCTAAGAATGTTATGCTTCCTCTATCAGAACCCACAATGCCAAGATCAGCAGGACGTCGTCAGCTCTTTACACAACCACACCCCATTCGTCATGCCACTACCAGAATAACACGTCATGGTTCCAATAAATATGCCAAAGTTTGGAGCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAACAAGCATCTGCATTTTCCGAACATGCTAGGTATTTGAATGCCTGTTACCATTACCCACTAAATCAAATGAAAAGGAAACACATCTCATCTTTGGGAGACCCACCAACAGAAGGATTTAGTGAAAATATAAACAAACTATCTTTGATTGACAGAAATTATTGGTTGCCATATAAAATGAATTTAATCTCTTTTCTTCAACATATGGAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGCTGCTTTGGAGGCAGAAATTATCTTCTTCAAGACTTGCCTCTGAAGGTGTTGCTAGTGACATATTTTCTGTTGGCTGTCTCTTAGCAGAACTTCATCTTTGCAGGCCACTCTTTGATTCAATCTCATTGGCAATATACTTCGAGGATGGAACCTTACCAGGATCTCTGCAGGAACTACCTCCTCATGTTAGACTACTTGTTGAAGCATGCATCCAAAAGGATTGGACGAGGAGGCCATCAGCTAAAAGTCTTCTGGAATCACCTTATTTTCCAAAGACAGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACTCGACTTCGTTATGCTGCAAATCTTGCAAAGCAGGGAGCTCTCAGGGAAATGGGAATTGATGAAATGCTTAACAGAACAAGCAGTGAAAACATTAATATTGCCAACCATACAGAAAATTTTACAGATAAAAGTTCAGCTGCCTCTGCTTCAGTTCTTCTAATCGGTTCTAGTGAGGAGATTGGTGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTGTGTGCAGATGGCATTGATGTCCTGGTCAGAATTGGAGGTGTTTTTGGGGAATCCTTTATCGTCAAACAGATGCTACCATTACTGAAAAATGTTGTTCGCTCCTTCATTGATATGTCATGCATGAATAAGCCTGATCCTGTTCAGAGTTGGAGTGCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGCCTTATAGCTTTCTTGACAGAAGAGATCATCGTAAAGGAGCTACTTGAAGACCTAAGTTGCATGCTCATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTTGCTGCTACTAATCTCTTTGGAATTTGTCAGCGGATTGGGGCAGATTTGACGGCATTGCATATTCTTCCTAAACTTAGAGAACTATTTGATGAGCTTGCTTTCTCCCAGGACATTTCCAAAGGTTCGACTACTGTTGGCAGAAACTTGAAGGTTACCAAATTAAAAGTTGGAGGGGACTTGCAAATTGAAAGTCGTATGGATCTAGTGTTGCTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTCGAACAATTTCTTCTACGTTGTCATAATTGGAAGCCTCATGTTTTGCTCATTTTTAAACCCGTTGCGGTTCAGTGGGAATATGCAGGAGAATCATCAAAAAGTGGCTCAGAAAATATTTTTGCCAGAAGACCTACAATTGCCCAGGGATTCACATCTGAGCACAATCCAGCAAAACTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAATTTGATTCCTCAGAGACGGTCATTTAAAGTTCAGCAAAGCCCTGTAGTAATGCATGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCGGAATTTCTTGGGCGGGTGGGGGTTCAGAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTAATCTACTCTATACGTGCACATCATGGAACAGTGAGGTCTCTGGCTGTTGATCAGGATGAATGTATTGTTTTCACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAAAAGTGGGAATTGAGCCGAACTAACTGTCTGTCTGGCTATTATGGCCATGATGAGGTGGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTAGCATCTTGTGATGGAACGATTCACATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGCGGAATCCCAAACAGAATCTGGCCATCCTGCAAGCCATCCACCCTCTGCGTTAAAAATTAACAGTGACCAAGCAAATGTCCTTAATTTGAATACACTATCAAATGGAATATTGTCTAGTGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTATTAGACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTGATATTGCCCGTGGTCAGAAGCTTCATATCTGGAGGGGGGAATCTAATGAATCTAGTTTTCCGTCACTTATTTCTGCCATTTGTTCCTCTGGTTCTGACAAGATGCAAGCAGGTGGAATTTCCACTTTGCCATCTTTAATTGCAACTGGACTAAGTTCTGGTCACTGTAAATTATTTGATGCAAAAAGTGGGAGTGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGATGAGCATCTGCTCATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTAAGAATGAATTTGCCATCCCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCAAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGACTTCTTTCCTTGTCTAAATCTGCCAATGAAACTGATGGTCAGTATCACATTATCCCACAGAAACTCTACGTTTCTGATAATGGAATGAGAAGCTTGTCAGCATTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACAGAAGATGGCTATTTGAGAATTTGCTGTTAG 5274 0.413 MKQAQGKRSAKMWMVLMCLMLSYFGRIESLSVTVNEVECIYEYVLYEGDTVSGNFVVVDHDIFWSSDHPGIDFTVTSPGGNTVHTIKGTSGDKFQFKAPIHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKGGGGWRVVVGEEAVKHRACNEKKIVELTQSEYIVDSSESTRSNDPDVGGSQYNDVVNGGMTSSDDSETRKASSRNRTCDHSGRFSCSRTISSLAPIARVEMSSYSTFQEVATDFLSGLSEDHVLDSLDLFIEGKASGRDSINFLSLLGLPSFEEDTFPGSLRHPNIAPVLAVLKTSDHINIVLPKTPYNLESILHFNPNALKSDWNRRFLIYQLLSALVYLHGLGVCHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQKSENINSKPVKLGCCNGSCHSNGLYADLKLSPSIDWHSSFHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDAGWRDLTKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAESPKDFIKLHRDALESNRVSFQLHHWIDITFGYKMSGQAAITAKNVMLPLSEPTMPRSAGRRQLFTQPHPIRHATTRITRHGSNKYAKVWSQTNEMQRETSLLSETAYLQELEQASAFSEHARYLNACYHYPLNQMKRKHISSLGDPPTEGFSENINKLSLIDRNYWLPYKMNLISFLQHMEEEDEGSSGYPDLLLWRQKLSSSRLASEGVASDIFSVGCLLAELHLCRPLFDSISLAIYFEDGTLPGSLQELPPHVRLLVEACIQKDWTRRPSAKSLLESPYFPKTVKSSYLFLAPLQLVAKDETRLRYAANLAKQGALREMGIDEMLNRTSSENINIANHTENFTDKSSAASASVLLIGSSEEIGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGVFGESFIVKQMLPLLKNVVRSFIDMSCMNKPDPVQSWSALALIDCMMTLDGLIAFLTEEIIVKELLEDLSCMLIGVLMQKHMEIAVLQVAATNLFGICQRIGADLTALHILPKLRELFDELAFSQDISKGSTTVGRNLKVTKLKVGGDLQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRCHNWKPHVLLIFKPVAVQWEYAGESSKSGSENIFARRPTIAQGFTSEHNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRSFKVQQSPVVMHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGTVRSLAVDQDECIVFTAGIGQGYKGTVQKWELSRTNCLSGYYGHDEVVNDICILSSSGRVASCDGTIHIWNSQTGKQISVFAESQTESGHPASHPPSALKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDIARGQKLHIWRGESNESSFPSLISAICSSGSDKMQAGGISTLPSLIATGLSSGHCKLFDAKSGSVISSWRAHDGYVTKLAAPDEHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSANETDGQYHIIPQKLYVSDNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC 1757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00062 1757 Pfam Protein kinase domain 368 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00062 1757 SMART WD40_4 1440 1477 IPR001680 GO:0005515
Sebi291g00062 1757 SMART WD40_4 1394 1437 IPR001680 GO:0005515
Sebi291g00062 1757 SMART WD40_4 1562 1618 IPR001680 GO:0005515
Sebi291g00062 1757 SMART WD40_4 1522 1559 IPR001680 GO:0005515
Sebi291g00062 1757 SMART WD40_4 1621 1659 IPR001680 GO:0005515
Sebi291g00062 1757 SMART WD40_4 1722 1757 IPR001680 GO:0005515
Sebi291g00062 1757 Gene3D Transferase(Phosphotransferase) domain 1 363 490 - -
Sebi291g00062 1757 MobiDBLite consensus disorder prediction 244 287 - -
Sebi291g00062 1757 Pfam emp24/gp25L/p24 family/GOLD 34 207 IPR009038 -
Sebi291g00062 1757 MobiDBLite consensus disorder prediction 244 275 - -
Sebi291g00062 1757 CDD Beach 512 742 IPR000409 -
Sebi291g00062 1757 Gene3D Transferase(Phosphotransferase) domain 1 863 962 - -
Sebi291g00062 1757 SMART Beach_2 510 742 IPR000409 -
Sebi291g00062 1757 ProSiteProfiles Trp-Asp (WD) repeats profile. 1628 1661 IPR001680 GO:0005515
Sebi291g00062 1757 Coils Coil 146 166 - -
Sebi291g00062 1757 Pfam WD domain, G-beta repeat 1624 1659 IPR001680 GO:0005515
Sebi291g00062 1757 Pfam WD domain, G-beta repeat 1442 1477 IPR001680 GO:0005515
Sebi291g00062 1757 Gene3D BEACH domain 503 752 IPR036372 -
Sebi291g00062 1757 SUPERFAMILY WD40 repeat-like 1397 1755 IPR036322 GO:0005515
Sebi291g00062 1757 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1628 1661 - -
Sebi291g00062 1757 PANTHER GH12955P 1019 1757 - -
Sebi291g00062 1757 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 44 130 IPR036598 -
Sebi291g00062 1757 SUPERFAMILY BEACH domain 500 742 IPR036372 -
Sebi291g00062 1757 ProSitePatterns Trp-Asp (WD) repeats signature. 1646 1660 IPR019775 -
Sebi291g00062 1757 SMART serkin_6 201 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00062 1757 ProSiteProfiles BEACH domain profile. 498 768 IPR000409 -
Sebi291g00062 1757 SUPERFAMILY Protein kinase-like (PK-like) 369 452 IPR011009 -
Sebi291g00062 1757 SUPERFAMILY Protein kinase-like (PK-like) 880 976 IPR011009 -
Sebi291g00062 1757 Pfam Beige/BEACH domain 512 723 IPR000409 -
Sebi291g00062 1757 Gene3D - 1371 1598 IPR015943 GO:0005515
Sebi291g00062 1757 Gene3D - 1599 1757 IPR015943 GO:0005515
Sebi291g00062 1757 ProSiteProfiles GOLD domain profile. 37 124 IPR009038 -
Sebi291g00062 1757 SMART EMP24_GP25L_2 29 208 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00062 Sebi-Chr291 1015868 1030525 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AurL-Cr-1 Sebi291g00062 Beach 1.1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00062 K17601 - cpap:110808319 1863.97