Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00058 ATGGAGCCACCTATACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAATATCATTCTGATAAAGAGGGGTTCTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATAAGAGAAGAGAGAGATCCTGAATACTCCTGCAGGTACATACCCCTTAGTCGGCCCAAAATCCCTCCTCCATCTAGTAGTCATACTGGTCCTGATTATTCTTTTCCATCTCTCTCTACATGTGATGAACTTGAGAAAAAAGCTGTGACTACTTTAGTTCGTTGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGCAGGAGAGTTCGGCAGATAAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCGAATATCATGTAAATGGACCATCTCAGCTGATGGTAAATCAGAGCATCGTGTATTAAGATCTGCCATTTTTATGGAATACGTTGAAGGTGGCTCCTTAAAAAGGTATCTAGAGAAGCTGTCAGGAGCTGGAGAAAAGCACGTTCCTGTGGAGTTGGCTTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTTGGAGCTGCACTCGAAACATATAATTCATCGTGACATAAAAAGTGAAAACATTCTATGTGATTTTGATAGGAAGAGAGATGATGGAACTCCCATTGTGAAGCTATGTGATTTTGATAGTGCAGTGCCACTAAGATCACCCTTACATGTATGCTGTATCGCTCATGTGGGAACACCACCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCCCCAGAGGTCATGCGGACTATGTATGAAAAAAACACTTATGGACTGGAAGCTGATATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACGTTGCAAATTCCATATTTTGGAGTACCTGATTCACACATACATGATAGTCTGCAGATGGGTAAACGACCACAATTAAGTGATGAGCTGGAGACATTAAGTTCAATGAATGAACCCACAATGATTCATTCTGGGGAAGAGACGGAAAAATCTGATTCTGAAATAGGTACTTTGAAGTTCCTTGTTGATTTGTTTCATAGGTGTGTGGAAGAAAATCCAAATGAACGACCTACTGCTGAAGAAATCCATGAAATGCTGGTTGGACATACAAAGCACCGACAAGGTCAACAAGATGTTGGTAAGATTTAG 1260 0.4111 MEPPIPCELVRGYLDFSPHAWNIILIKRGSTWVRMLVDACRPHDIREERDPEYSCRYIPLSRPKIPPPSSSHTGPDYSFPSLSTCDELEKKAVTTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNCLGEIRILGALKHPCIVEMYGHRISCKWTISADGKSEHRVLRSAIFMEYVEGGSLKRYLEKLSGAGEKHVPVELALYIAKDVSCALLELHSKHIIHRDIKSENILCDFDRKRDDGTPIVKLCDFDSAVPLRSPLHVCCIAHVGTPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHIHDSLQMGKRPQLSDELETLSSMNEPTMIHSGEETEKSDSEIGTLKFLVDLFHRCVEENPNERPTAEEIHEMLVGHTKHRQGQQDVGKI 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00058 419 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 40 409 - -
Sebi291g00058 419 FunFam Leucine-rich repeat protein kinase family protein 128 409 - -
Sebi291g00058 419 SUPERFAMILY Protein kinase-like (PK-like) 92 403 IPR011009 -
Sebi291g00058 419 ProSiteProfiles Protein kinase domain profile. 90 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00058 419 Pfam Protein kinase domain 117 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00058 419 Gene3D Transferase(Phosphotransferase) domain 1 186 417 - -
Sebi291g00058 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Sebi291g00058 419 Gene3D Phosphorylase Kinase; domain 1 90 185 - -
Sebi291g00058 419 SMART serkin_6 86 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00058 Sebi-Chr291 969073 972462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00058 133 399 MAP Kinase Kinase Kinase AT1G63700 30.741 6.12e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Sebi291g00058 Pkinase 4.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00058 - - tpra:123913087 722.62