Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00056 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAATCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGGTTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTTCACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGTTGTTGTTCTTCAATTTGCAAAAATGAAAAATTTTAAAGGGTCAGTAGGTGTTTCAAACACAACTTACAACTCTAAGTTGTTTATCAATGCCAATATTCCTGAAATTGAAGACTTTCAAATGAGGGTGAAATCTTCTGATTCTCAACAAGGTATTCAGTTTAGTCAGCTAAGTGATCATGCTTCTTTGACCCTTGAGGAAGAATTTCTTGAAAGAGGAGTGTACAAATCAATTGCTGATTTGAAAGAAGTAACACAGAATTCTGTTTTTGTAACAATTGGGACTGTTAAGGACATTGAGTCTGAATATAACTGGTGCTATCGTGCCTATTCTGCATCTTTTATCTTATTTGATAAAGAAGCCTCAAATTTCCTGAAAATTCTTGCATATGAACTTCGCACTTCATATATTGCCAAGGGTGGAGATAAGAATAGGCATCCCGAAGAGATTGATTCCTTTAAAGATAAGAAATTCCTTTTTAAAGTGCAAGTTAAGATTCAAGATATGGAGTCAATTGTTCCTTATGTCATTAGTATTTCAAGGCTTTGTTTTGAAGATAACATTATAGCTTCCTTTGAAAAGAAATACCAAATTGAAGAGGTAGTATTAATTCAAGACAACTCTGAACTTTTGAGTCAGTTTACTGAGTCCTCAGATCTGTTGAAGATACTCCAAGTCCCCTTTTACCGACTGGAAAAAACGGCATCGAATATGGATTCAAGTGTTATAAAGGTTCTTGATGTGGATCTTGCTGAGTATTGTGGAAATGCAAGTTTTGATACTCCCTCAAAATGCAAGGGTGAGATGCATTCTGAACAGACCATAGTTCGCGTTGCTGTTCATGGTGATGAACAATCTGCTAAGAAGCTGAGGAAAGTTATCAAGGAAGAGAAGAATTAG 1506 0.3645 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMQFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLVEFKKEGKPCNYVVIELENIEGGLKLRFTLWEDYAFMFLKHLEDHPSESYVVVLQFAKMKNFKGSVGVSNTTYNSKLFINANIPEIEDFQMRVKSSDSQQGIQFSQLSDHASLTLEEEFLERGVYKSIADLKEVTQNSVFVTIGTVKDIESEYNWCYRAYSASFILFDKEASNFLKILAYELRTSYIAKGGDKNRHPEEIDSFKDKKFLFKVQVKIQDMESIVPYVISISRLCFEDNIIASFEKKYQIEEVVLIQDNSELLSQFTESSDLLKILQVPFYRLEKTASNMDSSVIKVLDVDLAEYCGNASFDTPSKCKGEMHSEQTIVRVAVHGDEQSAKKLRKVIKEEKN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00056 501 Gene3D - 312 393 IPR012340 -
Sebi291g00056 501 Gene3D - 8 114 IPR012340 -
Sebi291g00056 501 CDD RPA1_DBD_A_like 21 108 - -
Sebi291g00056 501 SUPERFAMILY Nucleic acid-binding proteins 16 113 IPR012340 -
Sebi291g00056 501 Pfam Domain of unknown function DUF223 45 135 IPR003871 -
Sebi291g00056 501 SUPERFAMILY Nucleic acid-binding proteins 121 246 IPR012340 -
Sebi291g00056 501 CDD RPA1_DBD_B_like 141 246 - -
Sebi291g00056 501 Gene3D - 115 257 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00056 Sebi-Chr291 946136 948713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00056 20 237 Core DNA Replication Machinery Family AT2G06510 28.511 3.94e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00056 - - adu:107477146 400.979