Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00051 ATGGAAGATGATGGGTTGGTGCTATTGTTCTATGCCCCTGGTCAGAAGAAGTTGAGGTTTCTGCTCTCCCCTGTGGCAATGGTGCTGTTCATGCTGTTACTTCTCTCTCCATTTGCTTCCCCACTCAGTGATGAAGGACAAGCATTAATGGCGATCAAGGCTTCCTTGAGCAATATAGCAGACATACTCCTTGATTGGGATGACGTGCATAATGAAGACTTCTGCTCTTGGCGTGGAGTCTTCTGTGACAATGTCAGCCTTACTGTCATATCTCTGAATCTATCGAGCTTGAACCTGGGTGGAGAGATATCACCAGCCATTGGTGATTTAGGAAACTTGCAATCCATAGACCTACAAGGGAATAAACTATCTGGTCAAGTTCCAGATGAAATTGGCAACTGTGCTGAGCTTATTCATCTGGATTTGTCTGATAATCAGCTATATGGTGATATACCTTTCTCTATCTCAAAGCTAAAGAAACTAGAGTTCTTGAATTTAAAGAGTAATCAGCTGACTGGTCCTATCCCTTCAACTTTAACCCAAATTCCAAACCTGAAGACTCTTGATCTTGCTCGAAATAGGCTCACTGGAGAGATTCCAAGACTACTATATTGGAATGAAGTCTTGCAGTACCTAGGGCTGCGAGGGAACTTGTTGAGTGGAACTTTGTCCCCTGATATCTGTCAATTAACTGGTTTGTGTGATGTGAGAGGCAATAATTTGACTGGCACTATACCTGACAGTATTGGAAACTGTACAAGTTTTGAAATCTTGGATATATCATATAATCAGATTAGTGGGGAAATTCCATATAATATTGGGTTTCTGCAAGTTGCTACATTGTCACTTCAAGGAAATAGATTAACTGGGAAGATTCCAGAAGTGATTGGTTTGATGCAAGCCCTTGCCATTTTGGATTTGAGCGAGAATGAGTTAGTGGGACCAATTCCTCCTATACTTGGAAATCTCTCTTTTACTGGCAAGCTGTACCTTCATGGAAACATGCTTACTGGTCCAATACCACCTGAACTTGGCAATATGTCTAAATTAAGCTACCTGCAATTGAATGACAATCAACTAGTGGGAAAAATTCCTGATGAAATTGGGAAGCTGGAACATTTGTTTGAATTGAATCTTGCCAATAATAATCTTGATGGATCTATTCCACATAACATAAGCTCCTGCACTGCCTTAAATCAGTTTAATGTGCATGGTAACCAGTTAAGCGGTTCTATACCATTGAGTTTTCGCAGCCTTGAGAGTCTGACTTACTTGAATCTCTCTGCGAATAACTTCAAGGGGAATATACCTGTTGAGTTGGGCCATATAATTAATCTTGATACGCTGGATCTATCTAGCAATAATTTTTCTGGGCATGTCCCAGCTTCTGTCGGTTATCTAGAGCATCTTTTGACCCTTAACTTGAGTCATAACCGCCTTGATGGTACCTTTCCTGCTGAGTTTGGAAATCTCAGAAGCATACAGATTATTGATATGTCATTCAACAACCTGTCTGGAAGCATTCCTCCGGAAATTGGGCAGCTGCAAAACCTTGCATCTCTGATTTTGAACAACAATGACTTGCGTGGGAAGATTCCTGATCAGCTGACTAATTGTTTCAGTCTTTCCTCTTTGAACTTCTCTTATAATAACTTTTCTGGAGTTATTCCATCTATGAAGAATTTCTCACGATTTTCAGCTGACAGTGATTTTTTCGAGAGTTGCTGTTGTATGTCTTTCTCTTGGTATCATTATGCTATTGGCCATGGGCCCCCTAAACTGGTAGTTCTTCATATGGATATGGCTATCCACACCTTGGATGATATAATGAGAAGCACTGAGAATCTAAGTGAGAAATATATAATTGGGTATGGTGCCTCTAGTACAGTGTACAAGTGTGCTTTGAAAAATTCCCGGCCAATTGCAGTCAAGCGATTGTACAACCAGCATCCTCATGATTTAAGGGAATTTGAAACAGAACTTGAAACAATCGGCAGCATTAGACATAGAAACCTTGTCACCTTGCATGGTTATGCCCTTACTCCCTGTGGGAATCTCCTTTTCTATGATTATATGGCAAATGGATCTCTTTGGGATCTTCTACATGATAATAACACAGTAATGGAGGCTGTGGATCCAGAAGTCTCTATTACCTGTATTGATCTGGTCCATGTTAAGAAAACCTTTCAACTTGCTTTGCTTTGCACAAAAAGGAACCCTTCTGAGAGGCCTACCATGCATGAAGTAGCCAGGGTTCTGGTATCTCTACTTCCTGCACCTCCAAGTAAAGTGCTTGGTGCACCTGCTAAGACTTTTGACTATGCGCATTTTGTGAAGGGACAACACCGGAAAATGGATGGGCTACAACCTCAGCAGGACAACAATTCAACTAATGCTCAATGGTTTGTACGCTTTGGAGATGTTATTTCAAAGAGCACACTCTGA 2445 0.4098 MEDDGLVLLFYAPGQKKLRFLLSPVAMVLFMLLLLSPFASPLSDEGQALMAIKASLSNIADILLDWDDVHNEDFCSWRGVFCDNVSLTVISLNLSSLNLGGEISPAIGDLGNLQSIDLQGNKLSGQVPDEIGNCAELIHLDLSDNQLYGDIPFSISKLKKLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNLLSGTLSPDICQLTGLCDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLSFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNQLVGKIPDEIGKLEHLFELNLANNNLDGSIPHNISSCTALNQFNVHGNQLSGSIPLSFRSLESLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNRLDGTFPAEFGNLRSIQIIDMSFNNLSGSIPPEIGQLQNLASLILNNNDLRGKIPDQLTNCFSLSSLNFSYNNFSGVIPSMKNFSRFSADSDFFESCCCMSFSWYHYAIGHGPPKLVVLHMDMAIHTLDDIMRSTENLSEKYIIGYGASSTVYKCALKNSRPIAVKRLYNQHPHDLREFETELETIGSIRHRNLVTLHGYALTPCGNLLFYDYMANGSLWDLLHDNNTVMEAVDPEVSITCIDLVHVKKTFQLALLCTKRNPSERPTMHEVARVLVSLLPAPPSKVLGAPAKTFDYAHFVKGQHRKMDGLQPQQDNNSTNAQWFVRFGDVISKSTL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00051 814 SUPERFAMILY L domain-like 42 276 - -
Sebi291g00051 814 Gene3D Ribonuclease Inhibitor 40 101 IPR032675 -
Sebi291g00051 814 Gene3D Ribonuclease Inhibitor 102 313 IPR032675 -
Sebi291g00051 814 ProSiteProfiles Protein kinase domain profile. 616 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00051 814 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 587 691 - -
Sebi291g00051 814 Gene3D Ribonuclease Inhibitor 314 579 IPR032675 -
Sebi291g00051 814 SMART LRR_typ_2 182 206 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 110 134 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 347 370 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 158 181 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 515 539 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 371 395 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 467 490 IPR003591 -
Sebi291g00051 814 SMART LRR_typ_2 419 443 IPR003591 -
Sebi291g00051 814 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 42 206 - -
Sebi291g00051 814 SMART tyrkin_6 616 753 IPR020635 GO:0004713|GO:0006468
Sebi291g00051 814 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 207 314 - -
Sebi291g00051 814 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Sebi291g00051 814 SUPERFAMILY RNI-like 235 558 - -
Sebi291g00051 814 Pfam Protein kinase domain 619 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00051 814 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
Sebi291g00051 814 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Sebi291g00051 814 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Sebi291g00051 814 Pfam Leucine rich repeat N-terminal domain 43 83 IPR013210 -
Sebi291g00051 814 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 478 563 - -
Sebi291g00051 814 Pfam Leucine Rich repeat 183 198 IPR001611 GO:0005515
Sebi291g00051 814 Pfam Leucine Rich repeat 251 268 IPR001611 GO:0005515
Sebi291g00051 814 SUPERFAMILY Protein kinase-like (PK-like) 595 707 IPR011009 -
Sebi291g00051 814 Gene3D Phosphorylase Kinase; domain 1 591 691 - -
Sebi291g00051 814 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 315 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00051 Sebi-Chr291 845499 852480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00051 703 814 Receptor kinase-like Gene Family AT5G07180 57.143 3.67e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Sebi291g00051 Pkinase 4.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00051 K20718 - gmx:100811653 1164.83