Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00046 ATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAACCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTGTACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGTTGTTGTTCTTCAATTTGCAAAAATGAAAAATTTTAAAGGGTTTTAA 531 0.3729 MIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIEGGLKLRCTLWEDYAFMFLKHLEDHPSESYVVVLQFAKMKNFKGF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00046 176 Gene3D - 74 176 IPR012340 -
Sebi291g00046 176 Gene3D - 1 73 IPR012340 -
Sebi291g00046 176 CDD RPA1_DBD_B_like 100 176 - -
Sebi291g00046 176 CDD RPA1_DBD_A_like 2 67 - -
Sebi291g00046 176 SUPERFAMILY Nucleic acid-binding proteins 80 175 IPR012340 -
Sebi291g00046 176 SUPERFAMILY Nucleic acid-binding proteins 2 73 IPR012340 -
Sebi291g00046 176 Pfam Domain of unknown function DUF223 3 94 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00046 Sebi-Chr291 756809 757829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00046 6 175 Core DNA Replication Machinery Family AT2G06510 26.857 4.47e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00046 - - adu:107477146 210.69