Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00039 ATGGACAATGAAGAGAGAATCATTTACAGTTACCACACTGCTTTTCATGGTGTGGCTGCAAAACTGAGCCAAGAAGAAGCTGAGAAGCTAGAGGCAGAAGAAGGTGTTGTGGCCATATTCCCTGACACAAAGTATCAACTACACACCACAAGAAGTCCAACTTTCCTTGGGCTTGAACCAATGAAAAGCACTAACATTTGGTCAGAAAAACTAGCTAACCATGATGTTATAGTGGGAGTGTTGGACACAGGAATTTGGCCAGAGAGTGAGAGCTTCAATGACACAGGCATGAGACCAGTACCTCCTCACTGGAAAGGTGCATGTGAGACTGGCCGTGGCTTCAGAAAAAACCACTGCAATAAGAAGATTGTAGGGGCAAGAATATTCTACCTTGGATATGAAGCAGCAACAGGTAAAATTGATGAGCAAACAGAATACAAATCACCAAGAGATCAAGATGGTCATGGCACTCACACTGCAGCTACTGTTGCTGGCTCTCCAGTGCATGGTGCTAATCTTCTAGGCTATGCTTATGGCACGGCCAGAGGAATGGCACCAGGAGCAAGAATTGCAGCTTACAAAGTGTGCTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATAGAGCTGTAGCTGATGGAGTGAATGTTCTATCCATTTCTTTGGGTGGTGGAGTCTCATCTTACTACCGTGATAGTTTATCTGTAGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTATTTCTTGCTCTGCTGGAAATGCAGGGCCTGACCCTGTCAGTCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCAAGCACAATGGATAGAGATTTTCCTGCAGATGTTAAGCTTGGAAATGGAAGAAAGGTAACTGGAACCTCACTCTATAAAGGGAGAAGCATGCTCTCAGTTAAGAAACAATACCCTTTGGTTTACATGGGAAGTAACTCAAGCAGTCCTGATCCAAAATCTTTGTGCTTGGAAGGTACTTTGGATCGTAGAATGGTTGCAGGAAAGATTGTGATCTGTGATAGAGGCATTAGTCCTAGAGTCCAGAAAGGTCAGGTGGTGAAAAATGCAGGAGGTGTGGGAATGATTCTTACAAACACTGCAGCTAATGGAGAAGAGTTGGTTGCAGACTGTCACCTCCTTCCAGCAATTGCAGTTGGAGAGAATGAAGGCAAGGAAATCAAACATTATGTGTTAACAAGTAAAAAAGCTACTGCAACTCTAGCTTTTCTTGGTACAAGGTTGGGAATTAGACCATCTCCTGTAGTAGCAGCATTTTCATCAAGAGGGCCTAATTTGCTTACCCTTGAAATTCTAAAGCCTGATGTAGTTGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGACTCATTGGTCCATCCAATTTGCCAACAGATCATAGGAGGGTGAAGTTCAATATACTCTCAGGAACTTCAATGTCATGTCCACATGTGAGTGGGATTGCTGCTTTGCTCAAGGCTAGTCATCCAGAATGGAGTCCAGCTGCTATAAAATCTGCATTGATGACAACAGCTTATGTTCATGACAATACCTTGAAGCCTCTAAGAGATGCTTCAGGTGCTGAACCTTCAACTCCATATGATCATGGTGCTGGACACATTAACCCCACAAGAGCTCTTGCCCCAGGTTTAGTCTATGATATTGAACCCCAGGATTACTTTGAATTCCTGTGCACACAGAAGCTAACTCCACCCGAACTGGGAGTTTTTGCCAAACATTCAAACAGAACTTGCAAGCATTCTCTTGCCAGTCCAGGGGACTTGAACTACCCAGCTATATCAATAGTTTTTCCAGAGAAAACATCCATTTCAGTTTTGACCATTCACAGAACTACCACCAATGTTGGCCCTCCTACTTCCAAATACCATGTCATGGTTACACCATTTAAAGGTGCTTCTGTCAAAGTTGAGCCAGACACCTTGAATTTCACCAGAAAATACCAGAAACTGTCTTACAAAGTTATCTTCACAGCAAATTCTCGGCAAACTGAACCTGAATTTGGAGGTCTGGTGTGGAAGGATGGTTTGCACAGAGTAAGAAGCCCAATTGTAATAACATATCTACCACCAATATGA 2124 0.4355 MDNEERIIYSYHTAFHGVAAKLSQEEAEKLEAEEGVVAIFPDTKYQLHTTRSPTFLGLEPMKSTNIWSEKLANHDVIVGVLDTGIWPESESFNDTGMRPVPPHWKGACETGRGFRKNHCNKKIVGARIFYLGYEAATGKIDEQTEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEKGVFISCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVKLGNGRKVTGTSLYKGRSMLSVKKQYPLVYMGSNSSSPDPKSLCLEGTLDRRMVAGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAIAVGENEGKEIKHYVLTSKKATATLAFLGTRLGIRPSPVVAAFSSRGPNLLTLEILKPDVVAPGVNILAAWSGLIGPSNLPTDHRRVKFNILSGTSMSCPHVSGIAALLKASHPEWSPAAIKSALMTTAYVHDNTLKPLRDASGAEPSTPYDHGAGHINPTRALAPGLVYDIEPQDYFEFLCTQKLTPPELGVFAKHSNRTCKHSLASPGDLNYPAISIVFPEKTSISVLTIHRTTTNVGPPTSKYHVMVTPFKGASVKVEPDTLNFTRKYQKLSYKVIFTANSRQTEPEFGGLVWKDGLHRVRSPIVITYLPPI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00039 707 Pfam PA domain 313 403 IPR003137 -
Sebi291g00039 707 SUPERFAMILY Subtilisin-like 47 560 IPR036852 GO:0004252|GO:0006508
Sebi291g00039 707 CDD Peptidases_S8_3 45 522 IPR034197 -
Sebi291g00039 707 Pfam Fibronectin type-III domain 603 701 IPR041469 -
Sebi291g00039 707 Pfam Subtilase family 75 527 IPR000209 GO:0006508|GO:0008236
Sebi291g00039 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 486 496 IPR023828 -
Sebi291g00039 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 700 IPR045051 -
Sebi291g00039 707 FunFam Subtilisin-like protease SBT1.5 75 294 - -
Sebi291g00039 707 Gene3D - 281 425 - -
Sebi291g00039 707 CDD PA_subtilisin_like 287 417 - -
Sebi291g00039 707 FunFam subtilisin-like protease SBT1.5 281 424 - -
Sebi291g00039 707 ProSiteProfiles Serine proteases, subtilase domain profile. 44 556 - -
Sebi291g00039 707 Gene3D - 573 704 - -
Sebi291g00039 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 48 IPR037045 -
Sebi291g00039 707 Pfam Peptidase inhibitor I9 3 48 IPR010259 -
Sebi291g00039 707 Gene3D Peptidase S8/S53 domain 75 569 IPR036852 GO:0004252|GO:0006508
Sebi291g00039 707 PRINTS Subtilisin serine protease family (S8) signature 151 164 IPR015500 -
Sebi291g00039 707 PRINTS Subtilisin serine protease family (S8) signature 73 92 IPR015500 -
Sebi291g00039 707 PRINTS Subtilisin serine protease family (S8) signature 485 501 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00039 Sebi-Chr291 648028 650151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00039 3 707 Subtilisin-like Serine Gene Family AT5G51750 74.929 0.0 1117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00039 - - gmx:102661592 1293.87