Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00034 ATGGGAGCACTGATATGGCGGCAGATTCCATCTGCTAATTATTATTCCCTACCAATCCAAACAACCACTCATGATTATGAAGATCAGGTCTTTCATGATCCTTTGATTGATGCCACTGCCACTTCCACTGGTCTTCTTCCTTGTACAATTAGTCAAACGGTAAAGGGAAAGAAGCAAAAACAGTTACCAGCTGCTGCTGCTACAAAAACAAAAGATCATGAAAACAAGAAGTGGATGCATAGGGAGACTGAAAAACAAAGAAGGCAAGAAATGTCCAGGCTTTGCACCTCCTTTAGATCCCTTCTTCCTTTTGAATATATTAAGGGAAAGCGTTCAACTTCTGATCACATGCATGAGGGTACAAAGTATATCAAACACCTTGAGAATAAGGTGAAGCAGTTACAAGCAAAGAAGGATGAGTTGATGAAGTTATCTAATTTGAGTATCCATCCTGAAACCCATGTCATTGTTCATCCTTGTTCGGGAGGAGGTGTTCAGATTAAGTGTAGTTATAGCTTCAGGAAACATGAGTTTCCTTTGTCAAGAGTGTTAGATATAGTGCTCAAACAAGGGCTTAATGTCGTCAACTGTGTTTCCATCAAAACAGATGATCACAGATTCATACACACTATCCGATCAGAGGATCCACATTCAATGACCGAGATTAATTACAGTGAACTGCAAAGAAAGCTTATAGCAGCAATATCACCATCAAGTTTGGAGGAGACTGTACGTGTGAGTACCTGA 747 0.4003 MGALIWRQIPSANYYSLPIQTTTHDYEDQVFHDPLIDATATSTGLLPCTISQTVKGKKQKQLPAAAATKTKDHENKKWMHRETEKQRRQEMSRLCTSFRSLLPFEYIKGKRSTSDHMHEGTKYIKHLENKVKQLQAKKDELMKLSNLSIHPETHVIVHPCSGGGVQIKCSYSFRKHEFPLSRVLDIVLKQGLNVVNCVSIKTDDHRFIHTIRSEDPHSMTEINYSELQRKLIAAISPSSLEETVRVST 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00034 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
Sebi291g00034 248 Coils Coil 117 147 - -
Sebi291g00034 248 Gene3D - 66 150 IPR036638 GO:0046983
Sebi291g00034 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 144 IPR036638 GO:0046983
Sebi291g00034 248 Pfam Helix-loop-helix DNA-binding domain 77 128 IPR011598 GO:0046983
Sebi291g00034 248 MobiDBLite consensus disorder prediction 67 90 - -
Sebi291g00034 248 CDD bHLH_AtORG2_like 76 152 - -
Sebi291g00034 248 FunFam Transcription factor bHLH126 67 154 - -
Sebi291g00034 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 67 232 - -
Sebi291g00034 248 MobiDBLite consensus disorder prediction 57 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00034 Sebi-Chr291 589616 590794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00034 70 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 39.888 2.87e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi291g00034 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00034 - - gmx:100803786 281.567