Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00033 ATGCACTTGAAATGTTTCTGTTGTTTTCTCTCTGAAGAAGAGCAATCCCAAAAACGGACTGTAGAGAAGAAAAACAGGGACTATCCATGGGAAATATACACGTTGAAGGAGTTGCTTCGCGCAACAAACAACTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGGAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGCTGTGAAGCGGTTGAAGACGATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTTGAAGTACTTGGAAGGGTGAGGCATAAGAATTTATTGGGCTTGAGAGGGTTCTATGCAGGTGGAGAAGAAAGGTTGATTGTCTATGATTACATGCCTAATCACAGCTTACTCACTCATTTGCATGGTCAACTTGCTACCGATTGTCTATTAGATTGGCATAAAAGAATGTGCATAGCAATTGGGGCAGCTGAAGGCTTGGCTGCAAAGAAACCGATTGAGAAACTCCCTGGCGGTATAAAAAGGGATATTGTTCAGTGGGTCACACCGTATGTCCAAAAGGGTGTCTTCAATCATATTGCAGATTCAAAGTTGAAGGGGAATTATGATTTGGAACAATTGAAATCTGTGGTCACGATTGCTATGAGATGCACAGATAGTAGCCCGGATAAGAGGCCCAGCATGGTAGAGGTGGTGGATTGGCTTAAGGGTGGTGTTGGGAAGAGAAAAAAACAGATTCCAAATTTGAGTCACAAGCATGGAGGAGACGAAGAGAATGAAGAAAACTATGAAGAGATTGGAACAAAGCCGTCCAAGTTCAAAATACCAAGTGATAATGATAGGCTTAAAATAAGATAA 840 0.419 MHLKCFCCFLSEEEQSQKRTVEKKNRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLATDCLLDWHKRMCIAIGAAEGLAAKKPIEKLPGGIKRDIVQWVTPYVQKGVFNHIADSKLKGNYDLEQLKSVVTIAMRCTDSSPDKRPSMVEVVDWLKGGVGKRKKQIPNLSHKHGGDEENEENYEEIGTKPSKFKIPSDNDRLKIR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00033 279 Gene3D Transferase(Phosphotransferase) domain 1 154 240 - -
Sebi291g00033 279 Pfam Protein kinase domain 45 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00033 279 SUPERFAMILY Protein kinase-like (PK-like) 161 234 IPR011009 -
Sebi291g00033 279 ProSitePatterns Protein kinases ATP-binding region signature. 51 71 IPR017441 GO:0005524
Sebi291g00033 279 Gene3D Phosphorylase Kinase; domain 1 6 118 - -
Sebi291g00033 279 ProSiteProfiles Protein kinase domain profile. 45 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00033 279 PANTHER OS01G0253100 PROTEIN 156 235 - -
Sebi291g00033 279 MobiDBLite consensus disorder prediction 237 279 - -
Sebi291g00033 279 SUPERFAMILY Protein kinase-like (PK-like) 30 155 IPR011009 -
Sebi291g00033 279 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 118 - -
Sebi291g00033 279 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00033 Sebi-Chr291 571970 574084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00033 32 155 Trihelix Transcription Factor Family AT1G68690 45.238 1.07e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Sebi291g00033 Pkinase 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00033 - - cic:CICLE_v10007048mg 325.865