Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00017 ATGACTAAAAACCAAATTAGAAAAGAGAGGACACAATGCTTCATTCAGATTTTGAAAAGACAGATCAAACCAAAGCAACGTTTGGGTCCACCGGAGCTGAGCCACTGCTCGCACGGACTCCTTCTCTCCTCTCCACAGGTTCTGTGCTGTCTTCTCTCCTACACTTCAGATTCATGGCATTCTGTTCCTTACAGTTACACTGAGTGTCTTTGGCAAACTGCAAACATCAACCAAGTTGAGCTTCTTCAGGGATTTTGGCCTGAAGTGGGGCTTTTGGTGGATGGCAGTGATAAGAAAATTGTTATGGCTGTTGCCAGGAGCAACAGCAGCAGTGAACCTTCTACATCATACAATTGTTACAAAGTAGCAAGCTTGACTGAAACCATATTAGACACAAAGCAAACTGCTAATTTGAAAGATCGATACATTCTTGGGGAGCAATTGGGTTGGGGACAGTTTGGTGTCATAAAAGCATGCTCTGACAAACTGACAGGAGAGCTTTTGGCCTGCAAATCAATTGCTAAAGATAGGCTGGTTACCTCAGATGATATGCAGAGTGTTAAACTTGAAATTGAGATAATGGCTAAGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGACTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTGTTTCACTTGTTAGAGAAGCATGGGAGGTTTTATGAATCTGAAGCAAGGGTTCTCTTTCGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACTAGATCCTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTGCTGGCAGGTGCATATAACCAGGCTGCTGATATTTGGAGTGCAGGGGTTATTCTTTACATTCTACTAAGTGGGATGCCTCCATTTTGGGGAAAGACAAAATCACGGATATTTGAAGCTGTTAAGGCTGCTGATTTGAGGTTCCCTTCTGAACCTTGGGATTACATTTCTGAATCTGCTAAGGATTTAATTAGGGGAATGCTCTGCACAGAACCTTCTCAAAGGCTCACTGCCCAGGATGTTTTGGATCATTGCTGGATGGAAAGCAATCAAACATATCCTGAACTAAGTGGAGAGTGGGATGTTAACCGCAACTCATTCTCTGCCTCATTTATGTCTAGGAATCAGGACATCAGCTTTGGTGCTGGATCACCTATGTGTGATGCTCAATCACCTACTTTCACATGCAAATCATCATTTTCTTCCATTTTTGTGGAACCAGTGACACCTTGTTCTGCTACTGGTGGGTTTTCATTTGAGAGTTCAGGTGGTTCCACTGATTTGGAATTTTCTTCTCCTTTTCCCTCCATGCCTAGCTTTGCATTTCTTAGCCCCAGTTCTGTTACTGAGCAAAGGAGTTGTGTGTTAGAGTTCTCAACTAACGCGTCAGAAGTAAATGCAATTGCTGGAGACTCTCGCCTTTGCTTTGGACATCATATTAAAGAAAGGGATCTCAAGCCTGTAGAGGCTAAAAGGGCAGGTGGAACAAATGGCAATAGGGCATTGGGATTCCACAGCAAGAGAAACCGGACAATTGGACTCGGTGAGTGTGAGCAACTTGATCTTGTGGTGACTGAATCAGTGATTCGTTGGTCATCATGCACACAACTTCCAACATCACCAAGATCATCTCTTGTCTGTTGA 1803 0.4337 MTKNQIRKERTQCFIQILKRQIKPKQRLGPPELSHCSHGLLLSSPQVLCCLLSYTSDSWHSVPYSYTECLWQTANINQVELLQGFWPEVGLLVDGSDKKIVMAVARSNSSSEPSTSYNCYKVASLTETILDTKQTANLKDRYILGEQLGWGQFGVIKACSDKLTGELLACKSIAKDRLVTSDDMQSVKLEIEIMAKLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHGRFYESEARVLFRHLMQMVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADIWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWDYISESAKDLIRGMLCTEPSQRLTAQDVLDHCWMESNQTYPELSGEWDVNRNSFSASFMSRNQDISFGAGSPMCDAQSPTFTCKSSFSSIFVEPVTPCSATGGFSFESSGGSTDLEFSSPFPSMPSFAFLSPSSVTEQRSCVLEFSTNASEVNAIAGDSRLCFGHHIKERDLKPVEAKRAGGTNGNRALGFHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSPRSSLVC 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00017 600 ProSiteProfiles Protein kinase domain profile. 142 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00017 600 Gene3D Phosphorylase Kinase; domain 1 143 228 - -
Sebi291g00017 600 CDD STKc_CAMK 141 399 - -
Sebi291g00017 600 ProSitePatterns Protein kinases ATP-binding region signature. 148 175 IPR017441 GO:0005524
Sebi291g00017 600 SUPERFAMILY Protein kinase-like (PK-like) 139 451 IPR011009 -
Sebi291g00017 600 FunFam Calcium-dependent protein kinase 1 144 227 - -
Sebi291g00017 600 Pfam Protein kinase domain 144 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00017 600 Gene3D Transferase(Phosphotransferase) domain 1 229 428 - -
Sebi291g00017 600 SMART serkin_6 142 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi291g00017 600 FunFam Phosphoenolpyruvate carboxylase kinase 229 416 - -
Sebi291g00017 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 126 427 - -
Sebi291g00017 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00017 Sebi-Chr291 349669 353903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00017 125 410 EF-hand Containing Proteins AT3G57530 47.902 1.52e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi291g00017 Pkinase 6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00017 - - gmx:100776088 799.66