Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00014 ATGCCCCTGCCTCCTTCTCCTATACAACTCCCTCCTGACACCTCTTCCTCCGCACCAACCACTCCTTCCTCCTCTCCATCTCCGGCACCCTCCGGCTTTCGCTACCGTGGAACCCGTTGCCGGAGCGGGAAATGGGTGTCGGAGATAAGAGAGCCACGTAAAACGAAGCGCATTTGGCTGGGAACCTATGCCACTGCTGAAATGGCTGCTGCTGCCTATGATGTTGCTGCTCTCGCCTTGAAAGGACCAGACACGCAGCTCAACTTCCCCAATTCCATTCTCTCTTATCCCATTCCTGCTTCATTGTCCGCAACGGATATCCGTGCTGCTGCGGAAGCTGCTGCACAAGCCAGGCTGTTAAGGAACACGCCACAAGCACAAACACAGAGTGGAGAGGGTTCTGCGTCTGCGAGCAGCAATATTAGTGGAGCACAAGGTTTGATGATGAGTCATCATCAGGAATATATTGATGAAGATGAGCTTTTAAATATGCCGAATTTGCTGGATGATATGGCTCGTGGAATGCAGGTTAGTCCCCCGAGGATTAATGCTTCCTTTTCTTCGGATGAATCGCCTGGGAATTCCGATGGGGATAACCTCTGGAGTTACACTTTCTGA 618 0.5178 MPLPPSPIQLPPDTSSSAPTTPSSSPSPAPSGFRYRGTRCRSGKWVSEIREPRKTKRIWLGTYATAEMAAAAYDVAALALKGPDTQLNFPNSILSYPIPASLSATDIRAAAEAAAQARLLRNTPQAQTQSGEGSASASSNISGAQGLMMSHHQEYIDEDELLNMPNLLDDMARGMQVSPPRINASFSSDESPGNSDGDNLWSYTF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00014 205 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Sebi291g00014 205 MobiDBLite consensus disorder prediction 180 205 - -
Sebi291g00014 205 MobiDBLite consensus disorder prediction 1 37 - -
Sebi291g00014 205 SMART rav1_2 34 96 IPR001471 GO:0003700|GO:0006355
Sebi291g00014 205 FunFam Ethylene-responsive transcription factor 2 34 91 - -
Sebi291g00014 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 176 - -
Sebi291g00014 205 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Sebi291g00014 205 MobiDBLite consensus disorder prediction 178 205 - -
Sebi291g00014 205 Pfam AP2 domain 39 82 IPR001471 GO:0003700|GO:0006355
Sebi291g00014 205 MobiDBLite consensus disorder prediction 13 31 - -
Sebi291g00014 205 ProSiteProfiles AP2/ERF domain profile. 34 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00014 Sebi-Chr291 310779 311396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi291g00014 35 203 AP2-EREBP Transcription Factor Family AT5G52020 51.667 6.74e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi291g00014 AP2 4.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00014 - - gmx:100776717 242.276