Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi291g00005 ATGGATGGGGATCATAGCGATTTGGGTACTGTGCATGAAGGGAATGTTGATATTGGCCCTGACACATCGAATAACTTGGATTTGAATGTGGAGCAGAATTGTTGCAGCCCAAATATTGTTAATGCTAATTGCTCTCAGTCTGGTCTTCCATCAACAGATGTACCTAGCACCAATACAGTGTTGGGAATTGGTACTGAATTTGAGTCTGATGACCATGCATACAGATTCTATAATAGGTATGCCAGATTGGTGGGTTTCAATGTTAGAAAAGATTGGACAAATAGGAGTAAGGTACATGGTCAGGTAGTGTCTAGGAAATTTACCTGCTCCAAAGAGGGATACCGTAAGAAAGACAAAAGAGATGTTAATGTGAAGAAACATAGGAAGGAAACGAGAACTGGCTGCTTGGCACATATGATCGTCACTCGCCAACTGGATGGTAAATACAAGGTCACCCATTTTGAAGCTCAACATAATCATGACAATATAAACCCTATTCCTAGCAATGCTGAAATATTATTAAACTTGCAAACTGAATTTAGTGGTTCTCAAGCTGTGGAAGCTGACTCAAATAATAATTTGGGACCTAAATCAAGCCATTTTGTCAAGGATGCTGAATCTTTTGCAAAGGATCTATGGGTCAGTATTTATGACCCCAAGGATGAGGAAGAATTTACTCACGCTTGGGAGGCTATGCTGGAGAAGTATAATCTCCAGAAAAATGAATGGTTGAAATGGATGTATAGAGAAAGAGAGAAATGGGCTGTTGTTTTTGGACGTAATACATTTTTTGTAGACCTCAAAGGCTTTCATTTAGTAGATGAGCAACGTTACAAAGAAATAGAAGCTAGTGATGAAATGAGCAGGTGTTTGCCAAGGCTAATGGGTAATGTGGTTTTGTTGAAGCATGCAAGTGATGTTTATACTCCAAGAGCATTTGAAGTATTTCAGCGAGGATATGAAAAGTCTTTAAATGTTCTTGTTAACCAACACAATAGAAATGGATCATTGTTTGAGTATAAAGCAAATACATTTGGGCATACTAGACAATACAGTGTCACCTTCAATTCTTCAGATGATACAGTTGTCTGCAGTTGTATGAAGTTTGAGCATGTTGGATTTCTGTGTAGCCATGCTCTAAAAGTCCTTGACAACAGAAACATAAAAGTAGTTCCATCTCGGTATATCTTGAAGAGATGGACAAAAGATGCAAGGTTGGGAAATCTGAGGGAGATTAGCCAATGTAAAATGCAAGATAACCCTAAGATGGCTGTAGCAAGCTGTTACAAAGATTTGTGCCACAGACTTGTCAAGTTATCTGCAAGAGCCTCTGAATCTGTGGAGGCTTATCAATTTGCTGCAAGGCAACTTGATGAAGTGATGGAAGGAGTGGAGAAAATCTTGACATTGAAAGTTGAGGAAGCTCAAGTTATCACCCCAAGTAGTATTGATGTAAATGCTTCAGAAAGTGAGCCTGCAGAGATCTTTCTGAATGGACATGCAACTGAGGATCAGGATGAAAGTAACAGAGTAAATGGAGAAAAAGACAGGAGAGCTACACCAGCTAGGGGCCATCAAACAACTGGTTTATACAGTTTTGAAGCCAATCAAGGGGTTCACTGCGTGTATGAACAGCCTAATAGTGTGCTGGACCATCAATCTAATACTAACATGTTCCAACCGCCGAACTTCTTTTCTAACCAACAAAATTCTCCTGGCCAATCACAAATATTGCAGGAGCCTATAATCCAGAACACATACCATGAGTCCATGCCAAGCAATAATCAAATGCGACAGGGGATGGATCTTGACATCCAAAATCCACATTCATCTTCTTTCTTGCTGTATGACCATAGATACAGAAGTTCTGACTCTGCATAA 1881 0.3961 MDGDHSDLGTVHEGNVDIGPDTSNNLDLNVEQNCCSPNIVNANCSQSGLPSTDVPSTNTVLGIGTEFESDDHAYRFYNRYARLVGFNVRKDWTNRSKVHGQVVSRKFTCSKEGYRKKDKRDVNVKKHRKETRTGCLAHMIVTRQLDGKYKVTHFEAQHNHDNINPIPSNAEILLNLQTEFSGSQAVEADSNNNLGPKSSHFVKDAESFAKDLWVSIYDPKDEEEFTHAWEAMLEKYNLQKNEWLKWMYREREKWAVVFGRNTFFVDLKGFHLVDEQRYKEIEASDEMSRCLPRLMGNVVLLKHASDVYTPRAFEVFQRGYEKSLNVLVNQHNRNGSLFEYKANTFGHTRQYSVTFNSSDDTVVCSCMKFEHVGFLCSHALKVLDNRNIKVVPSRYILKRWTKDARLGNLREISQCKMQDNPKMAVASCYKDLCHRLVKLSARASESVEAYQFAARQLDEVMEGVEKILTLKVEEAQVITPSSIDVNASESEPAEIFLNGHATEDQDESNRVNGEKDRRATPARGHQTTGLYSFEANQGVHCVYEQPNSVLDHQSNTNMFQPPNFFSNQQNSPGQSQILQEPIIQNTYHESMPSNNQMRQGMDLDIQNPHSSSFLLYDHRYRSSDSA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi291g00005 626 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
Sebi291g00005 626 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 170 IPR031052 GO:0006355
Sebi291g00005 626 MobiDBLite consensus disorder prediction 500 522 - -
Sebi291g00005 626 SMART 26again6 362 389 IPR006564 GO:0008270
Sebi291g00005 626 ProSiteProfiles Zinc finger SWIM-type profile. 351 387 IPR007527 GO:0008270
Sebi291g00005 626 MobiDBLite consensus disorder prediction 497 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi291g00005 Sebi-Chr291 145263 148321 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi291g00005 FAR1 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi291g00005 - K17604 gmx:100809803 665.996