Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00140 ATGAGTCAGGACATTGCATATGCAAATCTTGCAAACTTGGATCCCCAATATGGACTATATACTAGTTTTGTGGCTCCTCTGGTTTATGCTTTCATGGGAAGCTCCAGAGATAATGCCATGGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGGACCATGCTTACTAATGAGATTAGTAACTACAAAAGTCATGAATATCTACGTCTTGCATTTACTGCCACCTTCTTTGCAGGAATCACTCAGATGGCACTTGGAGTTTTTAGGTTGGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTCTGGGATTTATGGGTGGAGCTGCTATTACTATTGCATTGCAACAACTTAAAGTGGAATTGGGAGACAATAGCCATTGGAGTAGCATTCTTGGTCTTCCTTCTTATAGCCAAGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTGCTCCTATGATCTCTATTATAGTGTCTACATTTTTTGTGTATATTACCAGGGCAGACAAGAAAGGTGTATCAATTGTAATGGAAAATATCTTGGCTGGTATTCGAATTGGTGTGGTAGCTGGTATGATAGCACTCACAGAATCTATAGCAATTGGGAGAATATTTGCTGCAAAGAAAGACTATTCATTGGACGGCAATAAAGAAATGGTGGCAATGGGAACAATGAATGTTATTGGTTCCCTGACATCATGTTATGTGGCAACAGGAGGTTTTGGTCGGTCAGCAGTGAATGATATGGCTGGGTGTAAAACCGCTGCATCAAACATTGTTATGTCAATTATTGTATTATTAACTATGATACTCATTACACCACTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCAATTATTATAGCTGCTGTGATGAGCCTTGTGGACATTAAGGCAATTGTTCTTTTGTGGAAGATTGACAAATTCGATTTTCTAGCTTGCATGGGAGCCTTTTTTGGTGTGATATTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTTGGGAAGCTTCCAGGGACTGCTGTTTATAGAAACATCCAACAATATCCCAAAGCAACTCAGATTCCTGGCATGCTGATTATTAGAGTTGACTCTGCAATATACTTCTCAAACTCCAACTATATCAAGGACAGAGTTTTGAAATGGCTGACTGATGAAGAGGTCCAAAGGACAACAAGTGAATTTCCCAAAATACAGTATCTCATTGTTGAAATGTCACCTGTTACTGATATAGACACTAGTGGCATCCATGCATTTGAAGATTTATTAAAGAGCCTTCATAAAAGAGAAGTCCAGCTTCTCCTGGCAAACCCAGGGCCAATTGTAACAGAGAAGCTCAACACATCCAAGTTATCGAGCTTGATTGGGGAAGGTAATATTTTTCTCTCGGTGGCTGATGCTGTTGCAACTTTTGGTGTAAAGGGTGGAGAAGTGTGA 1500 0.4013 MSQDIAYANLANLDPQYGLYTSFVAPLVYAFMGSSRDNAMGPVAVVSLLLGTMLTNEISNYKSHEYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAILGFMGGAAITIALQQLKVELGDNSHWSSILGLPSYSQAKKNKKLFWVAAIAPMISIIVSTFFVYITRADKKGVSIVMENILAGIRIGVVAGMIALTESIAIGRIFAAKKDYSLDGNKEMVAMGTMNVIGSLTSCYVATGGFGRSAVNDMAGCKTAASNIVMSIIVLLTMILITPLFKYTPNAVLASIIIAAVMSLVDIKAIVLLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTAVYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYIKDRVLKWLTDEEVQRTTSEFPKIQYLIVEMSPVTDIDTSGIHAFEDLLKSLHKREVQLLLANPGPIVTEKLNTSKLSSLIGEGNIFLSVADAVATFGVKGGEV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00140 499 CDD STAS_SulP_like_sulfate_transporter 370 485 - -
Sebi28g00140 499 ProSiteProfiles STAS domain profile. 369 492 IPR002645 -
Sebi28g00140 499 PANTHER SULFATE TRANSPORTER 141 490 IPR001902 GO:0016020|GO:0055085
Sebi28g00140 499 SUPERFAMILY SpoIIaa-like 371 492 IPR036513 -
Sebi28g00140 499 ProSitePatterns SLC26A transporters signature. 15 36 IPR018045 GO:0008271|GO:0008272
Sebi28g00140 499 Gene3D STAS domain 349 494 IPR036513 -
Sebi28g00140 499 FunFam Sulfate transporter 31 349 495 - -
Sebi28g00140 499 Pfam Sulfate permease family 139 317 IPR011547 GO:0016020
Sebi28g00140 499 Pfam Sulfate permease family 3 124 IPR011547 GO:0016020
Sebi28g00140 499 Pfam STAS domain 370 488 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi28g00140 Sebi-Chr28 2033688 2037501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00140 1 495 Inorganic Solute Cotransporters AT1G22150 65.074 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00140 K17470 - gmx:100784124 744.577