Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00080 ATGCTTATAAACACCTATTCTCATGTTGCAACAACCTTCAAATCTAGGGAGGATCACATAAAACAACTTGAATTAAATGAGGCATGTAAAGTTGAGCTTGCCCCCACTGAGGTAGATGAAGATGGACAAAAGATTAACCCTCATATCCCCCAATATATGTCTTTTGCTCCGTGGTATTTGAATGTTGAGAAAAAATATTATTTACTATGGAATGACCAATCCCGTATCTTTCAAGAAGATGACTACCCTCTTTCTGTTGCAAACATGTCTGAATATGCTATCAAAAAGACTCGAGGGGCATTCATAGCTGCAGTGCTTGCTATGCAAGGATTTGGAATCTTGGTTGCAGGAAAAATCTGGTTATTAGCGTACTATGCAGAGGATAATGGTGGAAAGAGCGGTTGGGGAAGATGGAGACATTGTAAACTTCTTCATTCAATTGGTCCCTTACATTACGTGAACAAAACAGGAATTATTCTGAAGGATTTTCAATCTTTCATTTAA 504 0.379 MLINTYSHVATTFKSREDHIKQLELNEACKVELAPTEVDEDGQKINPHIPQYMSFAPWYLNVEKKYYLLWNDQSRIFQEDDYPLSVANMSEYAIKKTRGAFIAAVLAMQGFGILVAGKIWLLAYYAEDNGGKSGWGRWRHCKLLHSIGPLHYVNKTGIILKDFQSFI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00080 167 Gene3D MFS general substrate transporter like domains 80 153 IPR036259 -
Sebi28g00080 167 PANTHER STEP II SPLICING FACTOR SLU7 11 65 IPR039974 GO:0000398|GO:0030628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi28g00080 Sebi-Chr28 1101266 1101769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00080 81 133 Inorganic Solute Cotransporters AT2G32830 62.264 6.29e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00080 K12819 - qsu:111991598 94.7449