Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00066 ATGACTTTGGGAGGCTTAGTTAGCACAGAATTTCCGATGAAGATGATTCCTTGGGGTGGTATCAGTTGCTGTTTGAGTGCTGCTGCTCTTTACCTTCTGCGGCAGAAGGCAGTGGCAGCACAACTGTTAGATACGGATATACTACCCTTGGTTGTTTCAATTTCTGGAAGAGTTGGTTCTGAAACCCCAATTAACTGCGAGTTCAGTGGCTTAAGAGGTGTAATAGTTGAAGAAACAGCTGAGCAACATTTTCTGAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTAATGCTATCCATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGACTGATCGTGTGCATGTAGTTGGAGCTCGTGGCGCCACTGGTTTTGTATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCAGGTCGGTCACTTGTACGTGGAACATTGGATTATCTCCAAGGTCTCAAGATGCTTGGAGTTAAGAGAATTGAACGGGTACTTCCTGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATATTGGGACCATTCGAATTCAGCGACCCCACAAAGGGCCATTTTATGTCTCTCCTAAAACGGTTGATCAACTCATTGCAAATCTCGGGAAATGGGCAAGGTGGTACAAGTATGCTTCTGTGGGATTGACAGTGTTTGGTGCATATCTAATAGCCAAGCATTTTATTCGGTACTTCTTGGAAAGACGGCGCCGCTATGAACTGCAAAAAAGGGTTCTTGCTGCAGCTTCTAAGAGATCAGGACAAGATAATGAAGGTGAAAAGACTGACAGCTTATCAGATGGTGCTAAAAAGGATCGCTTAATGCCAGATTTGTGTGTAATATGCCTCGAGCAGGAATATAATGCTGTTTTTGTTCCCTTGCTCTTCGCACTTGACCAATTGTCCTCTTTGCCGGCGACAGATAGAGAAGGTAGTGAAGACTTTTCGTCATTGAGTACTAAGCTTACATGGAATCCCAACTATAGAGCCACATGGAATGAGGAATCGTACCTTAAGAATCCAAGAGTAACAATTTGGTCAATGGTAATTGTATGA 1086 0.4355 MTLGGLVSTEFPMKMIPWGGISCCLSAAALYLLRQKAVAAQLLDTDILPLVVSISGRVGSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTDRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTVDQLIANLGKWARWYKYASVGLTVFGAYLIAKHFIRYFLERRRRYELQKRVLAAASKRSGQDNEGEKTDSLSDGAKKDRLMPDLCVICLEQEYNAVFVPLLFALDQLSSLPATDREGSEDFSSLSTKLTWNPNYRATWNEESYLKNPRVTIWSMVIV 361
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00066 361 Pfam E3 Ubiquitin ligase 82 230 IPR022170 GO:0004842|GO:0006996|GO:0016567
Sebi28g00066 361 PANTHER - 14 303 IPR044231 GO:0004842|GO:0016567
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi28g00066 Sebi-Chr28 994284 1000756 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00066 15 269 C3H Transcription Factor Family AT1G63900 71.168 7.79e-136 386
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00066 K15688 - gmx:100803252 503.442