Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00031 ATGGCTGAAATGATAAAGAATCAACCGTCACACTGTTGGTGGCTTGACAACCACAGCACCACTAAACGATCCCCATGGCTCCAATCCACACTCAATGAGCTAAATGAGAAGACAAAGGGAATGTTAAAATTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCTGAGATGTATTACAAGAAGAGGCCAGAGCTTGTGAGCATGGTTCAAGATTTCTATAGGACACACCGTTCTTTAGCTGAGAGATATGATCAAGTCAAACCTGACACTGGAATTCGCCTCCTCAAGACAGGGGAATCCCATTTTGCTTCATCAAAGTTTCATCAATCAGACAAGTTGATGAGTTTTGCTGATAATAAAGGTTATGATAGCTATTCTGAAAAATGTGATTTAGAAGAGTCTGTGGAATCTGAAGTTGATTATCTTGAGCAAGAAAAAGAAGAGGGTACCAAATTTGATAACAATAAAGAAAAGAAGGAAGTTCAGGTTGTGGCTGCAAATGATGAAGTACTGAAGAGTCTGAGGGAAGAAATTGAGAGACTCAATGAAGAGAACAAGGCTCATAAGGATCAGATCAAGCAGATAGATAACATTCGTGATGAAGTAATGATGTTGAGGGAAGAAATAGAAATACTCAGAGAAGAGAATAAAGAGCAGAAGGATGAACTCAAGCTGAAAGATACAATTTGTGATGAAGTAATGGTGTTAAGGGAAGAGATAGCAAGAGTCAGAGAAGAGAATATGGCACAAAAGGATTGTCTCAAGGAGAAAGATGTAGAGAAAATAGAGGTGATAAGACACTTGAGTGTAGCAATAGATTTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTTATTACTACCAAGAAATGGAAGAATCCCTTTGAGTTCAACAAACTCATTAAAGCATTCTCTAGGAAGTTGTTTCATCCAAGGAATCAGCCTAGTATGAACTTACCTGAGTATCCTAGAAATCTTATATACAAAACAAAAATGTTCCTGCCTCTCTTAGATCTCTTTTGGATTCGCCGTTGCCAACAAGCTTCTTCTTTTGGCTCCTTCCTGCTGATACCAGTGGCAGAAGGTGTTATTGTGACTATGGGTTTCAATTCTAGCTCTACTGTGGTGGTGAGGTTATCATTGTCCGAAGAAAATTCCCCTGTGCATGCCCTTACTCTGTTTGTGCTTCTTCTTTGTGCTTGTATTATCATTGGTCATCTTCTCGATAAGAGTCGATGGATGACTGAGTCAGTCATTGCCCTCATCATTGGCCTTGTTGCTGGAAACTTTATTATATTCGCAACTGGGTTAGGGCATTCACGCATCTTAGTATTCGATGAACAGCTTTTCTTTGCGTATCTTCTTCCACCCATCATTTTTAATGCAGGGTTCCAGGTGAAAAAGAAGCGATTTTTTCGAAACTTCTTGGCAATTATTTCATATGGTGTTCTAGGGACCCTAATAATGTTTCTCATTGTTTCACTGGGTTCATCCCTATTGTTCAAAAAATTGGAAATTTCATTGGACATGGGTGACTATTTAGCACTTGGTGCAGTGTTTTCAGCTACAGATTCTATTTGCACATTACAGGCGCTTAATCAGGAAGAGACACCTCTTTTGTACAGCATAGTTTTTGGTGAAAATGTGGTGAATGATGCCACATCTGTGCTTCTTTTTAATGCAATCCAGAGACTTGACCTCTCAAACATCACCTCAACCAATGTTAGACAGCTTGTTGGAAATTTTTTTGACTTGTTTGTGACAAGCACAGTGATGGGAGTAGTTGTTGGCTTGTTTAGTGCTTACATGACAAAGAAGTTGTGTTTTGGCAGGTCGTTGGAAGCTAGTTATCCATGTCTTTCCCCTTACGAAGTTGTGCATTCCACTGATCGAGAAGTTGCTCTTATGATCCTAATCGCCTACTTTTCTTATATCTTCGCTGAACTTCTGGGTTTAAGTGGGATCCTTACGGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATGTGGCAGAGAACTCTAAAATCACAAGCAGGCATGTTTTTGCAACATTATCTTTTATCGTGGAGAGTTTCATCTTCTTGTATGTTGGTGTGGATGCATTGAATAGGGACAACTGGACCTTTGCCAGCAACAGTCCATGGACAGTGATTTGGGCATCTGCAATACTGCTTTTCTTGATTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTATCATTTGTAGGCAATTTTTTCCGCAAGTCTGAGACTGACAAAATTGGTCTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCCATTGCACTTGCATATAAGAAGTTTACTATATTAGGGCGTACTAGACTGCCAGGGAATGCTATGATGATCAGCAGCACCATTACTGTTGTTATCTTAACTAATGTGGTGGGTGGATTACTGACCAAGCCTCTAATAAGGTTGTTGTTGGATTCCCATGAGCATGTGGGTAGCTCAATATCATCTGGGTTGTTAACTACCAGGAATCTGCCTCTACTCTCCAATGGACAACATTCAGATCAATCTAATAGAGACACCGGCAACCCCCTTCATTCGAATCAAAGTATCCATCATTATTGGCGAATGTTTGATGATACTTTCATGCGCCCTGTTTTTGGTGGCAGGGGATTTCTACCACCTCTTAATTATCCTGCACCAGCTTCACCAGGAGAGGGCACTAGCAAAACCCAAAATTAA 2745 0.4062 MAEMIKNQPSHCWWLDNHSTTKRSPWLQSTLNELNEKTKGMLKLIEEDADSFAQRAEMYYKKRPELVSMVQDFYRTHRSLAERYDQVKPDTGIRLLKTGESHFASSKFHQSDKLMSFADNKGYDSYSEKCDLEESVESEVDYLEQEKEEGTKFDNNKEKKEVQVVAANDEVLKSLREEIERLNEENKAHKDQIKQIDNIRDEVMMLREEIEILREENKEQKDELKLKDTICDEVMVLREEIARVREENMAQKDCLKEKDVEKIEVIRHLSVAIDLLKQENVKMRSFITTKKWKNPFEFNKLIKAFSRKLFHPRNQPSMNLPEYPRNLIYKTKMFLPLLDLFWIRRCQQASSFGSFLLIPVAEGVIVTMGFNSSSTVVVRLSLSEENSPVHALTLFVLLLCACIIIGHLLDKSRWMTESVIALIIGLVAGNFIIFATGLGHSRILVFDEQLFFAYLLPPIIFNAGFQVKKKRFFRNFLAIISYGVLGTLIMFLIVSLGSSLLFKKLEISLDMGDYLALGAVFSATDSICTLQALNQEETPLLYSIVFGENVVNDATSVLLFNAIQRLDLSNITSTNVRQLVGNFFDLFVTSTVMGVVVGLFSAYMTKKLCFGRSLEASYPCLSPYEVVHSTDREVALMILIAYFSYIFAELLGLSGILTVFFCGILMSHYTWHNVAENSKITSRHVFATLSFIVESFIFLYVGVDALNRDNWTFASNSPWTVIWASAILLFLILLGRAAFVFPLSFVGNFFRKSETDKIGLKQQFVIWWAGLMRGAVSIALAYKKFTILGRTRLPGNAMMISSTITVVILTNVVGGLLTKPLIRLLLDSHEHVGSSISSGLLTTRNLPLLSNGQHSDQSNRDTGNPLHSNQSIHHYWRMFDDTFMRPVFGGRGFLPPLNYPAPASPGEGTSKTQN 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00031 914 Coils Coil 165 230 - -
Sebi28g00031 914 PANTHER SODIUM/HYDROGEN EXCHANGER 383 888 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Sebi28g00031 914 Pfam KIP1-like protein 13 85 IPR011684 GO:0003779
Sebi28g00031 914 Gene3D - 510 562 - -
Sebi28g00031 914 Pfam Sodium/hydrogen exchanger family 396 822 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi28g00031 914 PRINTS Na+/H+ exchanger signature 479 487 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00031 914 PRINTS Na+/H+ exchanger signature 464 478 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00031 914 PRINTS Na+/H+ exchanger signature 450 461 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00031 914 PRINTS Na+/H+ exchanger signature 518 528 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00031 914 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi28g00031 Sebi-Chr28 511873 527285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00031 370 910 Antiporters AT3G05030 56.093 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00031 - K14724 cave:132168792 634.795