Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00030 ATGGGTTTCAATTCCAGCTCTAATGCGGTGATGAGGTTAGGGTTATCTTCATCCCAAGAAAATCCCTCTGTGTATGCCATTACTCTATTTGTGGTTCTTCTTTGTGCTTGTATCATCATTGGCCACCTACTCGAAAAGAGTCGATGGTTGACTGAATCAGTCATTGCCCTCATCATTGGCCTTGTTGCCGGAAACATAATTCTATTCGCGACTGGGAGGAGGCGTTCACACGTTTTGGTATTCAATGAAAAGCTTTTCTTTGTATATCTTCTTCCACCCATCATATTTAATGCCGGGTTCCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTTTTGGCAATAATTTTGTATGGTGTTGTTGGGACCCTAATGTCGTTTCTCGTTGTATCACTGGGTTCATTTCTGTTGTTCGAAAAATTGGGCATTGATTCACTGGACTTGGGTGACTATTTAGCACTTGGTGCAGCATTTTCAGCTACAGGTTCTGTCTGCACATTACAGGCGCTTAATAAGGAAGAGACACCTCTTCTGTACAGTTTAGTTTTTGGTGAAGATGTGGTCAATGATGCCACATCTGTGGTTCTTTTCCATGTAATCCAAGGATTTGACCTCGCAAACATCACCTGGGCCAATGCCAGGCAGCTTGTGGAAAATTTTTTTGGTTTATTCGTGACAAGCACTTTGCTGGGAGTAGCTGTTGGCTTGCTTAGTGCTTACATTATAAAGAAGTTCTATTTTGGCAGGCATTCTACTGATCGAGAAGTTGCTCTTATGATCCTGTTGGCTTACTTTTCTTACATATTTGCTGAAATTATCGATTTAAGTGGGATCCTTACCGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATACCGCAAAAAATTCTAGAATCACAAGTAGGCATACTTTTGCAACAATTTCTTTTATCGTCGAGAGTTTCATCTTCTTGTATGTTGGTGTGCATGCATTGGATACAGACAACATGATATTTGTCAGCAACAGTTCATCAACATTACTTGGGACATCTGCAATACTGCTTTGCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTGTCATTTATTGCCAATTCTTTCCGAAAGTCTGAGAATGACAAGATTGGTTTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGATTATGCGAGGTGCTGTATCCATTGCACTTGTATTTAAGAAGTTTACTATGTCAGGACATTCTCGACTGGAAGGGGATGCTATCATGATCACCAGCACCATAACAGTGGTTCTCTTAACTAATGTGGTGGGTGGATTACTGACCAAGCCTCTAATAAGGTTGTTGTTGGATTCCCATAGGCATGTAGGTAGCTCAATGTCATCTGGGTTGTTTACTACCAGGAATCTGCCTCTACTCTCCAATGGACAACATTCAGATCAATCTAATAGAGACAACCGGCAACCCCCTTGA 1464 0.4167 MGFNSSSNAVMRLGLSSSQENPSVYAITLFVVLLCACIIIGHLLEKSRWLTESVIALIIGLVAGNIILFATGRRRSHVLVFNEKLFFVYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVVGTLMSFLVVSLGSFLLFEKLGIDSLDLGDYLALGAAFSATGSVCTLQALNKEETPLLYSLVFGEDVVNDATSVVLFHVIQGFDLANITWANARQLVENFFGLFVTSTLLGVAVGLLSAYIIKKFYFGRHSTDREVALMILLAYFSYIFAEIIDLSGILTVFFCGILMSHYTWHNTAKNSRITSRHTFATISFIVESFIFLYVGVHALDTDNMIFVSNSSSTLLGTSAILLCLVLLGRAAFVFPLSFIANSFRKSENDKIGFKQQFVIWWAGIMRGAVSIALVFKKFTMSGHSRLEGDAIMITSTITVVLLTNVVGGLLTKPLIRLLLDSHRHVGSSMSSGLFTTRNLPLLSNGQHSDQSNRDNRQPP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00030 487 Gene3D - 24 452 IPR038770 -
Sebi28g00030 487 NCBIfam sodium/hydrogen exchanger 3 24 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00030 487 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00030 487 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00030 487 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00030 487 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi28g00030 487 MobiDBLite consensus disorder prediction 465 487 - -
Sebi28g00030 487 Pfam Sodium/hydrogen exchanger family 31 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi28g00030 487 PANTHER SODIUM/HYDROGEN EXCHANGER 16 449 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi28g00030 Sebi-Chr28 496844 505671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00030 17 486 Antiporters AT3G05030 60.334 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00030 - K14724 cave:132168792 596.275