Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00024 ATGAAACTACAGAATTTTGAACAAGTCTTTGACAACAAACACTATGTGCAAGAAAAACTAGGCACTAAGCTTACTATAGATTACTTTGGTGATTCAGTTTCTGCAAATTTGAAATCCAAAGGGAAAAGTTCAGAGTTTCCTGAAAATGGATGTAGGATGAAAAAAGCTGAAGCTTCCGTTGAGGGGTTCTTCAAGAATGATAAAGCTAACAAGTCTAAGCTTGATTATTTGTCTGCATCAGAGGATTCTGAAGGTGAACATGCGAAGAACAGTGTCAATGGAACAGAATCAGTTTTATCAAAGTTAGCTACGACTACTAACAAGAACAGTTCAATCAATACAAAGTTTTCGGATACTAAATTAAAGTTGAATTCCCATAAGAATTGGGTAAACAAGCATTCGGAAGCTGAATTCAGCAAGAGCTCTCATAAGAGAGGCAAGTTTGAATGTACTGCTTGCAACAAAACCTTCCATTCATACCAAGCTCTTGGAGGTCATAAAGCTAGTCATAAGAAGATCAAATTTAAGCAGTATTTGTGA 540 0.3593 MKLQNFEQVFDNKHYVQEKLGTKLTIDYFGDSVSANLKSKGKSSEFPENGCRMKKAEASVEGFFKNDKANKSKLDYLSASEDSEGEHAKNSVNGTESVLSKLATTTNKNSSINTKFSDTKLKLNSHKNWVNKHSEAEFSKSSHKRGKFECTACNKTFHSYQALGGHKASHKKIKFKQYL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00024 179 PANTHER OS02G0659100 PROTEIN 58 174 - -
Sebi28g00024 179 SUPERFAMILY beta-beta-alpha zinc fingers 146 173 IPR036236 -
Sebi28g00024 179 ProSitePatterns Zinc finger C2H2 type domain signature. 150 170 IPR013087 -
Sebi28g00024 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 175 IPR013087 -
Sebi28g00024 179 Pfam C2H2-type zinc finger 148 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi28g00024 Sebi-Chr28 338258 338797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00024 130 175 C2H2 Transcription Factor Family AT2G37430 54.348 1.92e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00024 - - gmx:102666705 154.836